Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.100167
C030010F05Rik
RIKEN cDNA C030010F05 gene
13
402740
Mm.100167
C030047E14Rik
RIKEN cDNA C030047E14 gene
13
77611
Mm.100167
Pde8b
phosphodiesterase 8B
13
218461
Human Homolog
PDE8B[phosphodiesterase 8B]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGTAGCAGC
(
3
)
GTTTTTAAAT
3.2
0.0032
P8 GC+1d culture
GTTTTTAAAT
2.3
0.0023
P8 GC+SHH+1d culture
GTTTTTAAAT
3.5
0.0035
3T3 fibroblasts
CACGCCCCCA
(
4
)
TGTATCCCCA
(
4
)
10.5
0.0105
Hypothalamus
GTTTTTAAAT
TGATGAAATG
(
3
)
7.2
0.0072
E12.5 retina
GTTTTTAAAT
3.8
0.0038
E14.5 retina
TTTGATGCTT
(
3
)
1.8
0.0018
E16.5 retina
GTTTTTAAAT
7.2
0.0072
P0.5 retina
GTTTTTAAAT
TGATGAAATG
(
3
)
TTTGATGCTT
(
3
)
6
0.006
P2.5 retina
GTTTTTAAAT
TGTATCCCCA
(
4
)
5.3
0.0053
P4.5 retina
TGATGAAATG
(
3
)
2
0.002
P6.5 retina
CACGCCCCCA
(
4
)
GTTTTTAAAT
TGTATCCCCA
(
4
)
10
0.01
P10.5 crx- retina
CACGCCCCCA
(
4
)
GTTTTTAAAT
TGATGAAATG
(
3
)
TGATTCAGGT
(
3
)
15
0.015
P10.5 crx+ retina
TGATGAAATG
(
3
)
TGATTCAGGT
(
3
)
TTTGATGCTT
(
3
)
5.7
0.0057
Adult retinal
AAGTAGCAGC
(
3
)
CACGCCCCCA
(
4
)
GTTTTTAAAT
TGATGAAATG
(
3
)
TGATTCAGGT
(
3
)
13.1
0.0131
ONL
AAGTAGCAGC
(
3
)
CACGCCCCCA
(
4
)
TGATGAAATG
(
3
)
7.6
0.0076
