Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10027	Prpf4b	PRP4 pre-mRNA processing factor 4 homolog B (yeast)	13		19134
Gene Ontology	ATP binding | chromosome | kinase activity | mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | transferase activity
Human Homolog	PRPF4B[PRP4 pre-mRNA processing factor 4 homolog B (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCAAGGGT GGAAGTGGGC 4.9 0.0049 Cb medulloblastoma AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 11.5 0.0115 P8 GC+1d culture AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 12.5 0.0125 P8 GC+SHH+1d culture GGAAGTGGGC 7 0.007 3T3 fibroblasts GGAAGTGGGC 7 0.007 E15 cortex AGCCAAGGGT GGAAGTGGGC 19.7 0.0197 P1 cortex TCAGTGTTGA (2) 4.5 0.0045 Hypothalamus GGAAGTGGGC TCAGTGTTGA (2) TGTTAAAATT 9 0.009 E12.5 retina GGAAGTGGGC 13.1 0.0131 E14.5 retina AGCCAAGGGT GGAAGTGGGC 9.1 0.0091 E16.5 retina AGCCAAGGGT GGAAGTGGGC TTGTCTTTCA 14.4 0.0144 E18.5 retina GGAAGTGGGC 7.3 0.0073 P0.5 retina AGCCAAGGGT GGAAGTGGGC 15.7 0.0157 P2.5 retina AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) TTGTCTTTCA 14.1 0.0141 P4.5 retina AGCCAAGGGT GGAAGTGGGC TAATTCCTTT TCAGTGTTGA (2) 25.7 0.0257 P6.5 retina AGCCAAGGGT GGAAGTGGGC 16.7 0.0167 P10.5 crx- retina AGCCAAGGGT GGAAGTGGGC TAATTCCTTT TGTTAAAATT 9.4 0.0094 P10.5 crx+ retina AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 17.2 0.0172 Adult retinal AGCCAAGGGT GGAAGTGGGC TCAGTGTTGA (2) 13 0.013 ONL AGCCAAGGGT TAATTCCTTT TCAGTGTTGA (2) TGTTAAAATT TTGTCTTTCA 15.2 0.0152