Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1008	Ptgds	prostaglandin D2 synthase (brain)	2	2 A3 (2 12.9 cM)	19215
Gene Ontology	extracellular space | isomerase activity | membrane | prostaglandin biosynthesis | prostaglandin metabolism | prostaglandin-D synthase activity | transport | transporter activity
Human Homolog	PTGDS[prostaglandin D2 synthase 21kDa (brain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGCGATGAG (3) 6.5 0.0065 P8 Cb GC GTGACCTGGC (3) 1.6 0.0016 Cb medulloblastoma GTGACCTGGC (3) 173.4 0.1734 Cb medulloblastoma GCCACCCTCT (3) 11.6 0.0116 Cb medulloblastoma TGACCAGCCC (2) 9.2 0.0092 Cb medulloblastoma ATCTTGGTCT (2) 2.3 0.0023 Cb medulloblastoma CGGAAGTCCT (2) 2.3 0.0023 Cb medulloblastoma GGGCGATGAG (3) 2.3 0.0023 P8 GC+1d culture GCCACCCTCT (3) 4.6 0.0046 P8 GC+1d culture GGGCGATGAG (3) 3.4 0.0034 P8 GC+1d culture GTGACCTGGC (3) 3.4 0.0034 P8 GC+SHH+1d culture GTGACCTGGC (3) 5.9 0.0059 P8 GC+SHH+1d culture GGGCGATGAG (3) 3.5 0.0035 P8 GC+SHH+1d culture TCAGAAAAAA (4) 2.3 0.0023 3T3 fibroblasts GGGCGATGAG (3) 3.5 0.0035 E15 cortex GGGCGATGAG (3) 9.9 0.0099 P1 cortex GTGACCTGGC (3) 9.1 0.0091 Hypothalamus GTGACCTGGC (3) 248.1 0.2481 Hypothalamus TGACCAGCCC (2) 34.4 0.0344 Hypothalamus GCCACCCTCT (3) 16.3 0.0163 Hypothalamus CGAAGAGCAG 10.9 0.0109 Hypothalamus CGGAAGTCCT (2) 7.2 0.0072 Hypothalamus ATCTTGGTCT (2) 5.4 0.0054 Hypothalamus GTACTGCAGC 3.6 0.0036 Hypothalamus GGGCGATGAG (3) 1.8 0.0018 E12.5 retina GTGACCTGGC (3) 1.9 0.0019 E14.5 retina TGACCAGCCC (2) 1.8 0.0018 E16.5 retina TGACCAGCCC (2) 1.8 0.0018 E18.5 retina GGGCGATGAG (3) 5.5 0.0055 E18.5 retina TGACCAGCCC (2) 1.8 0.0018 P0.5 retina GTGACCTGGC (3) 3.9 0.0039 P2.5 retina GCCACCCTCT (3) 1.8 0.0018 P2.5 retina TCAGAAAAAA (4) 1.8 0.0018 P4.5 retina GTGACCTGGC (3) 9.9 0.0099 P4.5 retina GGGCGATGAG (3) 2 0.002 P6.5 retina GTGACCTGGC (3) 5 0.005 P6.5 retina GGGCGATGAG (3) 1.7 0.0017 P10.5 crx- retina GCCACCCTCT (3) 7.4 0.0074 P10.5 crx- retina GTGACCTGGC (3) 5.6 0.0056 P10.5 crx+ retina GTGACCTGGC (3) 11.5 0.0115 P10.5 crx+ retina GCCACCCTCT (3) 3.8 0.0038 P10.5 crx+ retina GGGCGATGAG (3) 3.8 0.0038 Adult retinal GTGACCTGGC (3) 5.6 0.0056 Adult retinal GGGCGATGAG (3) 3.7 0.0037 ONL GGGCGATGAG (3) 5.7 0.0057 ONL GTGACCTGGC (3) 3.8 0.0038 ONL GCCACCCTCT (3) 1.9 0.0019 ONL TCAGAAAAAA (4) 1.9 0.0019