Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.101316	Mkrn2	makorin, ring finger protein, 2	6		67027
Gene Ontology	nucleic acid binding | protein ubiquitination | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	MKRN2[makorin, ring finger protein, 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC GAGTCCTGGC (9) 1.6 0.0016 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma AACTGCAGAG (6) 11.6 0.0116 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture AACTGCAGAG (6) 5.7 0.0057 P8 GC+1d culture GAGTCCTGGC (9) 2.3 0.0023 P8 GC+1d culture CACCTTTCTG (3) 1.1 0.0011 P8 GC+1d culture GAGTCTCCTG (7) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture GAGTCCTGGC (9) 4.7 0.0047 P8 GC+SHH+1d culture AACTGCAGAG (6) 3.5 0.0035 P8 GC+SHH+1d culture CACCTTTCTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGTCTCCTG (7) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAAACTG (2) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts GAGTCCTGGC (9) 7 0.007 E15 cortex GAGTCCTGGC (9) 9.9 0.0099 E15 cortex AACTGCAGAG (6) 4.9 0.0049 E15 cortex GAGTCTCCTG (7) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex AACTGCAGAG (6) 9.1 0.0091 P1 cortex GAGTCCTGGC (9) 9.1 0.0091 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus AACTGCAGAG (6) 3.6 0.0036 Hypothalamus GAGTCCTGGC (9) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina GAGTCCTGGC (9) 5.6 0.0056 E12.5 retina GAGTCTCCTG (7) 5.6 0.0056 E12.5 retina AACTGCAGAG (6) 3.8 0.0038 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina GAGTCTCCTG (7) 3.6 0.0036 E14.5 retina AACTGCAGAG (6) 1.8 0.0018 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina AACTGCAGAG (6) 5.4 0.0054 E16.5 retina GAGTCCTGGC (9) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina GAGTCTCCTG (7) 9.1 0.0091 E18.5 retina AACTGCAGAG (6) 1.8 0.0018 E18.5 retina GAGTCCTGGC (9) 1.8 0.0018 E18.5 retina TGCAAAACTG (2) 1.8 0.0018 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina GAGTCCTGGC (9) 11.8 0.0118 P0.5 retina GAGTCTCCTG (7) 7.9 0.0079 P0.5 retina AACTGCAGAG (6) 3.9 0.0039 P0.5 retina CACCTTTCTG (3) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina AACTGCAGAG (6) 5.3 0.0053 P2.5 retina GAGTCCTGGC (9) 5.3 0.0053 P2.5 retina GAGTCTCCTG (7) 5.3 0.0053 P2.5 retina TGCAAAACTG (2) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina AACTGCAGAG (6) 11.9 0.0119 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina GAGTCCTGGC (9) 6.7 0.0067 P6.5 retina AACTGCAGAG (6) 5 0.005 P6.5 retina GAGTCTCCTG (7) 5 0.005 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina AACTGCAGAG (6) 14.9 0.0149 P10.5 crx- retina GAGTCCTGGC (9) 3.7 0.0037 P10.5 crx- retina GAGTCTCCTG (7) 1.9 0.0019 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina AACTGCAGAG (6) 11.5 0.0115 P10.5 crx+ retina GAGTCTCCTG (7) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal GAGTCCTGGC (9) 9.3 0.0093 Adult retinal GAGTCTCCTG (7) 3.7 0.0037 ONL TGTGTGTGTG (115) 23 0.023 ONL AACTGCAGAG (6) 3.8 0.0038 ONL GAGTCTCCTG (7) 1.9 0.0019