Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.102305	Tnrc6	trinucleotide repeat containing 6	7		233833
Mm.102305	2010321I05Rik	RIKEN cDNA 2010321I05 gene	7		76695
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 116 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACTTTTTGGC (2) 4.9 0.0049 P8 Cb GC TTGTTTTGAA (2) 4.9 0.0049 P8 Cb GC TGTGTGCTGG (3) 1.6 0.0016 P8 Cb GC TTTGTGCTGG (3) 1.6 0.0016 Cb medulloblastoma TGGTTTGAAG (6) 6.9 0.0069 Cb medulloblastoma ACTTTTTGGC (2) 4.6 0.0046 Cb medulloblastoma AGAGAATTGG (3) 2.3 0.0023 Cb medulloblastoma CTGTTTTGTG (4) 2.3 0.0023 Cb medulloblastoma GTTCTCAGGA (2) 2.3 0.0023 Cb medulloblastoma TTGTTTTGAA (2) 2.3 0.0023 P8 GC+1d culture ACTTTTTGGC (2) 8 0.008 P8 GC+1d culture TTGTTTTGAA (2) 6.8 0.0068 P8 GC+1d culture CAGCAGCCTC (7) 3.4 0.0034 P8 GC+1d culture GTTCTCAGGA (2) 3.4 0.0034 P8 GC+1d culture TTTGTGCTGG (3) 2.3 0.0023 P8 GC+1d culture ACTTCGTTAA (2) 1.1 0.0011 P8 GC+1d culture CTGTTTTGAA (7) 1.1 0.0011 P8 GC+SHH+1d culture ACTTTTTGGC (2) 4.7 0.0047 P8 GC+SHH+1d culture GTTCTCAGGA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGAGAATTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGTTTTGAA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGGTTTGAAG (6) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGGATGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAGCCTTC (2) 1.2 0.0012 3T3 fibroblasts GCCCACAATA (3) 7 0.007 3T3 fibroblasts TGTGTGCTGG (3) 3.5 0.0035 E15 cortex ACTTTTTGGC (2) 9.9 0.0099 E15 cortex CAGCAGCCTC (7) 4.9 0.0049 E15 cortex GTTCTCAGGA (2) 4.9 0.0049 E15 cortex TTTGTGCTGG (3) 4.9 0.0049 P1 cortex AGAGAATTGG (3) 4.5 0.0045 P1 cortex TGTGTGCTGG (3) 4.5 0.0045 P1 cortex TTGTTTTGAA (2) 4.5 0.0045 Hypothalamus TTGTTTTGAA (2) 7.2 0.0072 Hypothalamus ACTTCGTTAA (2) 1.8 0.0018 Hypothalamus CAGCAGCCTC (7) 1.8 0.0018 Hypothalamus CTGTTTTGAA (7) 1.8 0.0018 Hypothalamus GTTCTCAGGA (2) 1.8 0.0018 Hypothalamus TCAGGTCTCT (3) 1.8 0.0018 E12.5 retina ACTTTTTGGC (2) 9.4 0.0094 E12.5 retina TGGTTTGAAG (6) 7.5 0.0075 E12.5 retina ACTTCGTTAA (2) 5.6 0.0056 E12.5 retina GCCCACAATA (3) 5.6 0.0056 E12.5 retina TGTGTGCTGG (3) 1.9 0.0019 E12.5 retina TTGCCTACCT (3) 1.9 0.0019 E12.5 retina TTGTTTTGAA (2) 1.9 0.0019 E14.5 retina GTTCTCAGGA (2) 3.6 0.0036 E14.5 retina ACTTCGTTAA (2) 1.8 0.0018 E14.5 retina ACTTTTTGGC (2) 1.8 0.0018 E14.5 retina CAGCAGCCTC (7) 1.8 0.0018 E14.5 retina TGGTTTGAAG (6) 1.8 0.0018 E14.5 retina TTGCCTACCT (3) 1.8 0.0018 E16.5 retina ACTTTTTGGC (2) 5.4 0.0054 E16.5 retina TTGTTTTGAA (2) 5.4 0.0054 E16.5 retina CTGTTTTGAA (7) 3.6 0.0036 E16.5 retina GTTCTCAGGA (2) 3.6 0.0036 E16.5 retina ACTTCGTTAA (2) 1.8 0.0018 E16.5 retina CTGTTTTGTG (4) 1.8 0.0018 E16.5 retina TGGTTTGAAG (6) 1.8 0.0018 E16.5 retina TTGCCTACCT (3) 1.8 0.0018 E16.5 retina TTTGTGCTGG (3) 1.8 0.0018 E18.5 retina ACTTTTTGGC (2) 5.5 0.0055 E18.5 retina GTTCTCAGGA (2) 3.6 0.0036 E18.5 retina ACTTCGTTAA (2) 1.8 0.0018 E18.5 retina CAGCAGCCTC (7) 1.8 0.0018 E18.5 retina TGGTTTGAAG (6) 1.8 0.0018 E18.5 retina TGTGTGCTGG (3) 1.8 0.0018 P0.5 retina TTGTTTTGAA (2) 5.9 0.0059 P0.5 retina ACTTTTTGGC (2) 2 0.002 P0.5 retina GTTCTCAGGA (2) 2 0.002 P0.5 retina TTTAGCCTTC (2) 2 0.002 P2.5 retina ACTTTTTGGC (2) 12.3 0.0123 P2.5 retina CTGTTTTGAA (7) 1.8 0.0018 P2.5 retina GTTCTCAGGA (2) 1.8 0.0018 P2.5 retina TCAGGTCTCT (3) 1.8 0.0018 P2.5 retina TGGTTTGAAG (6) 1.8 0.0018 P2.5 retina TGTGTGCTGG (3) 1.8 0.0018 P2.5 retina TTGTTTTGAA (2) 1.8 0.0018 P2.5 retina TTTAGCCTTC (2) 1.8 0.0018 P2.5 retina TTTGTGCTGG (3) 1.8 0.0018 P4.5 retina GTTCTCAGGA (2) 4 0.004 P4.5 retina TTGTTTTGAA (2) 4 0.004 P4.5 retina AGAGAATTGG (3) 2 0.002 P4.5 retina CTGTTTTGAA (7) 2 0.002 P4.5 retina TGGTTTGAAG (6) 2 0.002 P4.5 retina TGTGGGATGT (3) 2 0.002 P6.5 retina ACTTTTTGGC (2) 6.7 0.0067 P6.5 retina TGGTTTGAAG (6) 6.7 0.0067 P6.5 retina ACTTCGTTAA (2) 5 0.005 P6.5 retina CTGTTTTGAA (7) 5 0.005 P6.5 retina GTTCTCAGGA (2) 5 0.005 P6.5 retina CAGCAGCCTC (7) 1.7 0.0017 P6.5 retina TGTGGGATGT (3) 1.7 0.0017 P10.5 crx- retina ACTTTTTGGC (2) 7.4 0.0074 P10.5 crx- retina TTGTTTTGAA (2) 3.7 0.0037 P10.5 crx- retina CTGTTTTGAA (7) 1.9 0.0019 P10.5 crx- retina TGGTTTGAAG (6) 1.9 0.0019 P10.5 crx- retina TTTAGCCTTC (2) 1.9 0.0019 P10.5 crx+ retina ACTTTTTGGC (2) 17.3 0.0173 P10.5 crx+ retina TGGTTTGAAG (6) 5.8 0.0058 P10.5 crx+ retina AGAGAATTGG (3) 1.9 0.0019 P10.5 crx+ retina GTTCTCAGGA (2) 1.9 0.0019 P10.5 crx+ retina TGTGGGATGT (3) 1.9 0.0019 P10.5 crx+ retina TGTGTGCTGG (3) 1.9 0.0019 P10.5 crx+ retina TTTAGCCTTC (2) 1.9 0.0019 Adult retinal ACTTTTTGGC (2) 5.6 0.0056 Adult retinal ACTTCGTTAA (2) 3.7 0.0037 Adult retinal TTGTTTTGAA (2) 3.7 0.0037 Adult retinal AGAGAATTGG (3) 1.9 0.0019 Adult retinal CTGTTTTGAA (7) 1.9 0.0019 ONL CAGCAGCCTC (7) 3.8 0.0038 ONL TGGTTTGAAG (6) 3.8 0.0038 ONL ACTTTTTGGC (2) 1.9 0.0019 ONL CTGTTTTGTG (4) 1.9 0.0019 ONL TGTGGGATGT (3) 1.9 0.0019 ONL TGTGTGCTGG (3) 1.9 0.0019