Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.102365	4833438C02Rik	RIKEN cDNA 4833438C02 gene	19		107243
Mm.102365	Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2, p49/p100	19	19 45.75 cM	18034
Gene Ontology	cell growth and/or maintenance | DNA binding | lymph gland development | nucleus | protein binding | regulation of transcription, DNA-dependent | signal transduction | transcription coactivator activity | transcription factor activity
Human Homolog	NFKB2[nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGAGACAAGG (4) 6.5 0.0065 P8 Cb GC TAAGAAAAGG (4) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TGAGACAAGG (4) 9.2 0.0092 Cb medulloblastoma GGCCCCTCCC (9) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGAGACAAGG (4) 5.7 0.0057 P8 GC+1d culture GGCCCCTCCC (9) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GGCCCCTCCC (9) 2.3 0.0023 P8 GC+SHH+1d culture ACAGTTAAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAGACAAGG (4) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGAGACAAGG (4) 14 0.014 3T3 fibroblasts GGCCCCTCCC (9) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GGCCCCTCCC (9) 14.8 0.0148 E15 cortex TAAGAAAAGG (4) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCCCTAATTT (5) 27.3 0.0273 P1 cortex GGCCCCTCCC (9) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGAGACAAGG (4) 5.4 0.0054 Hypothalamus CCCCTAATTT (5) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TGAGACAAGG (4) 3.8 0.0038 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGAGACAAGG (4) 3.6 0.0036 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ACAGTTAAGT (2) 5.4 0.0054 E16.5 retina TGAGACAAGG (4) 5.4 0.0054 E16.5 retina GGCCCCTCCC (9) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGAGACAAGG (4) 10.9 0.0109 E18.5 retina GGCCCCTCCC (9) 1.8 0.0018 E18.5 retina TAAGAAAAGG (4) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina GGCCCCTCCC (9) 5.9 0.0059 P0.5 retina TGAGACAAGG (4) 3.9 0.0039 P0.5 retina AGGGAGTCAG (3) 2 0.002 P0.5 retina TAAGAAAAGG (4) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GGCCCCTCCC (9) 5.3 0.0053 P2.5 retina TGAGACAAGG (4) 5.3 0.0053 P2.5 retina CCCCTAATTT (5) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGAGACAAGG (4) 4 0.004 P4.5 retina GGCCCCTCCC (9) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina AGGGAGTCAG (3) 3.3 0.0033 P6.5 retina CCCCTAATTT (5) 1.7 0.0017 P6.5 retina GGCCCCTCCC (9) 1.7 0.0017 P6.5 retina TGAGACAAGG (4) 1.7 0.0017 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GGCCCCTCCC (9) 5.6 0.0056 P10.5 crx- retina ACAGTTAAGT (2) 1.9 0.0019 P10.5 crx- retina TGAGACAAGG (4) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCCCTAATTT (5) 1.9 0.0019 P10.5 crx+ retina GGCCCCTCCC (9) 1.9 0.0019 P10.5 crx+ retina TGAGACAAGG (4) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CCCCTAATTT (5) 3.7 0.0037 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCCCTAATTT (5) 7.7 0.0077