Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.102761
2600005C20Rik
RIKEN cDNA 2600005C20 gene
17
72462
Human Homolog
KIAA0179[KIAA0179]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 45 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGGGGGGGTT
CCTTTAATCC (
3
)
53.8
0.0538
Cb medulloblastoma
CCTTTAATCC (
3
)
41.6
0.0416
P8 GC+1d culture
AGGCTACCAG
CCTTTAATCC (
3
)
34.3
0.0343
P8 GC+SHH+1d culture
AGGCTACCAG
CCTTTAATCC (
3
)
27
0.027
3T3 fibroblasts
AGGCTACCAG
CCTTTAATCC (
3
)
GAGGGAAGGA
77.1
0.0771
E15 cortex
CCTTTAATCC (
3
)
54.4
0.0544
P1 cortex
AGGGGGGGTT
CCTTTAATCC (
3
)
159
0.159
Hypothalamus
AGGGGGGGTT
CCTTTAATCC (
3
)
GAGGGAAGGA
23.5
0.0235
E12.5 retina
AGGGGGGGTT
CCTTTAATCC (
3
)
GAGGGAAGGA
TCAAAGAATG
(
2
)
80.8
0.0808
E14.5 retina
CCTTTAATCC (
3
)
120.3
0.1203
E16.5 retina
AGGGGGGGTT
CCTTTAATCC (
3
)
70.6
0.0706
E18.5 retina
AGGGGGGGTT
CCTTTAATCC (
3
)
25.4
0.0254
P0.5 retina
AGGCTACCAG
AGGGGGGGTT
CCTTTAATCC (
3
)
TCAAAGAATG
(
2
)
80.5
0.0805
P2.5 retina
AGGGGGGGTT
CCTTTAATCC (
3
)
73.9
0.0739
P4.5 retina
CCTTTAATCC (
3
)
43.6
0.0436
P6.5 retina
AGGCTACCAG
CCTTTAATCC (
3
)
71.7
0.0717
P10.5 crx- retina
AGGCTACCAG
CCTTTAATCC (
3
)
65.1
0.0651
P10.5 crx+ retina
AGGCTACCAG
AGGGGGGGTT
CCTTTAATCC (
3
)
GAGGGAAGGA
47.9
0.0479
Adult retinal
AGGGGGGGTT
CCTTTAATCC (
3
)
144.4
0.1444
ONL
AGGCTACCAG
AGGGGGGGTT
CCTTTAATCC (
3
)
91.9
0.0919
