Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.10299
Col5a2
procollagen, type V, alpha 2
1
12832
Mm.10299
1110014L14Rik
RIKEN cDNA 1110014L14 gene
1
73740
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 104 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
P8 Cb GC
TCAGATCTGT
(
3
)
3.3
0.0033
P8 Cb GC
GAGGGTAAAG (
7
)
1.6
0.0016
P8 Cb GC
TTATTAAAAA (
12
)
1.6
0.0016
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
Cb medulloblastoma
ATCAAAGTTC
(
2
)
2.3
0.0023
Cb medulloblastoma
CCTGGGCTCT (
3
)
2.3
0.0023
Cb medulloblastoma
GAGGGTAAAG (
7
)
2.3
0.0023
Cb medulloblastoma
TCACATCTGT
(
5
)
2.3
0.0023
Cb medulloblastoma
TGTGTGCGAG (
8
)
2.3
0.0023
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
ATCAAAGTTC
(
2
)
4.6
0.0046
P8 GC+1d culture
TTATTAAAAA (
12
)
4.6
0.0046
P8 GC+1d culture
TTTTTTTCCC (
7
)
3.4
0.0034
P8 GC+1d culture
GTGTTCCTGG
(
6
)
2.3
0.0023
P8 GC+1d culture
ATGGCACACT
(
2
)
1.1
0.0011
P8 GC+1d culture
GTGACAACTA
(
4
)
1.1
0.0011
P8 GC+1d culture
TAACAGAAGC
(
2
)
1.1
0.0011
P8 GC+1d culture
TCACATCTGT
(
5
)
1.1
0.0011
P8 GC+1d culture
TCAGATCTGT
(
3
)
1.1
0.0011
P8 GC+1d culture
TGTGTGCGAG (
8
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
GTGTTCCTGG
(
6
)
3.5
0.0035
P8 GC+SHH+1d culture
TCACATCTGT
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
TTATTAAAAA (
12
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGACAACTA
(
4
)
1.2
0.0012
3T3 fibroblasts
TAACAGAAGC
(
2
)
21
0.021
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
3T3 fibroblasts
GTGTTCCTGG
(
6
)
3.5
0.0035
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
P1 cortex
CCTGGGCTCT (
3
)
4.5
0.0045
P1 cortex
TCAGATCTGT
(
3
)
4.5
0.0045
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
Hypothalamus
CCTGGGCTCT (
3
)
1.8
0.0018
Hypothalamus
GTGTTCCTGG
(
6
)
1.8
0.0018
Hypothalamus
TCAGATCTGT
(
3
)
1.8
0.0018
Hypothalamus
TGTGTGCGAG (
8
)
1.8
0.0018
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E12.5 retina
ATCAAAGTTC
(
2
)
9.4
0.0094
E12.5 retina
TCACATCTGT
(
5
)
5.6
0.0056
E12.5 retina
GTGTTCCTGG
(
6
)
3.8
0.0038
E12.5 retina
TTTTTTTCCC (
7
)
1.9
0.0019
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E14.5 retina
CCTGGGCTCT (
3
)
3.6
0.0036
E14.5 retina
TTATTAAAAA (
12
)
3.6
0.0036
E14.5 retina
ATCAAAGTTC
(
2
)
1.8
0.0018
E14.5 retina
ATGGCACACT
(
2
)
1.8
0.0018
E14.5 retina
GTGTTCCTGG
(
6
)
1.8
0.0018
E14.5 retina
TAACAGAAGC
(
2
)
1.8
0.0018
E14.5 retina
TTTTTTTCCC (
7
)
1.8
0.0018
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E16.5 retina
ATCAAAGTTC
(
2
)
5.4
0.0054
E16.5 retina
GAGGGTAAAG (
7
)
1.8
0.0018
E16.5 retina
GTGACAACTA
(
4
)
1.8
0.0018
E16.5 retina
GTGTTCCTGG
(
6
)
1.8
0.0018
E16.5 retina
TCACATCTGT
(
5
)
1.8
0.0018
E16.5 retina
TTATTAAAAA (
12
)
1.8
0.0018
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
ATCAAAGTTC
(
2
)
7.3
0.0073
E18.5 retina
TTTTTTTCCC (
7
)
3.6
0.0036
E18.5 retina
GTGACAACTA
(
4
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P0.5 retina
ATCAAAGTTC
(
2
)
3.9
0.0039
P0.5 retina
CCTGGGCTCT (
3
)
2
0.002
P0.5 retina
TCACATCTGT
(
5
)
2
0.002
P0.5 retina
TCAGATCTGT
(
3
)
2
0.002
P0.5 retina
TTTTTTTCCC (
7
)
2
0.002
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P2.5 retina
ATCAAAGTTC
(
2
)
7
0.007
P2.5 retina
ATGGCACACT
(
2
)
1.8
0.0018
P2.5 retina
GAGGGTAAAG (
7
)
1.8
0.0018
P2.5 retina
GTGACAACTA
(
4
)
1.8
0.0018
P2.5 retina
TCACATCTGT
(
5
)
1.8
0.0018
P2.5 retina
TCAGATCTGT
(
3
)
1.8
0.0018
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P4.5 retina
ATCAAAGTTC
(
2
)
4
0.004
P4.5 retina
TCACATCTGT
(
5
)
4
0.004
P4.5 retina
TCAGATCTGT
(
3
)
2
0.002
P4.5 retina
TTATTAAAAA (
12
)
2
0.002
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P6.5 retina
ATCAAAGTTC
(
2
)
11.7
0.0117
P6.5 retina
TTATTAAAAA (
12
)
5
0.005
P6.5 retina
TTTTTTTCCC (
7
)
3.3
0.0033
P6.5 retina
GTGTTCCTGG
(
6
)
1.7
0.0017
P6.5 retina
TCACATCTGT
(
5
)
1.7
0.0017
P6.5 retina
TGTGTGCGAG (
8
)
1.7
0.0017
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx- retina
TTATTAAAAA (
12
)
3.7
0.0037
P10.5 crx- retina
TTTTTTTCCC (
7
)
3.7
0.0037
P10.5 crx- retina
GAGGGTAAAG (
7
)
1.9
0.0019
P10.5 crx- retina
TCACATCTGT
(
5
)
1.9
0.0019
P10.5 crx- retina
TGTGTGCGAG (
8
)
1.9
0.0019
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
P10.5 crx+ retina
ATCAAAGTTC
(
2
)
9.6
0.0096
P10.5 crx+ retina
CCTGGGCTCT (
3
)
1.9
0.0019
P10.5 crx+ retina
TTTTTTTCCC (
7
)
1.9
0.0019
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
Adult retinal
ATCAAAGTTC
(
2
)
5.6
0.0056
Adult retinal
ATGGCACACT
(
2
)
1.9
0.0019
Adult retinal
TGTGTGCGAG (
8
)
1.9
0.0019
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
TTTTTTTCCC (
7
)
3.8
0.0038
ONL
TTATTAAAAA (
12
)
1.9
0.0019
