Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.103811	Pcdh8	protocadherin 8	14	14 43.0 cM	18530
Gene Ontology	calcium ion binding | integral to plasma membrane | morphogenesis of embryonic epithelium | somitogenesis
Human Homolog	PCDH8[protocadherin 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma ATGAGAAAAA (3) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture ATGAGAAAAA (3) 4.6 0.0046 P8 GC+1d culture TATTTGAAAA (3) 1.1 0.0011 P8 GC+1d culture TATTTGAGGA (3) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 3T3 fibroblasts TATTTGAGGA (3) 3.5 0.0035 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex ACGAATCCTT 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina ATGAGAAAAA (3) 5.6 0.0056 E12.5 retina ACGAATCCTT 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina ATGAGAAAAA (3) 2 0.002 P0.5 retina TATTTGAGGA (3) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina ATGAGAAAAA (3) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina ATGAGAAAAA (3) 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ACGAATCCTT 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TATTTGAAAA (3) 3.8 0.0038 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TATTTGAAAA (3) 3.8 0.0038 ONL TATTTGAGGA (3) 3.8 0.0038 ONL ATGAGAAAAA (3) 1.9 0.0019