Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10528	Hars	histidyl-tRNA synthetase	18		15115
Gene Ontology	ATP binding | cytoplasm | histidine-tRNA ligase activity | histidyl-tRNA aminoacylation | ligase activity | protein biosynthesis | tRNA aminoacylation for protein translation | tRNA ligase activity
Human Homolog	HARS[histidyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCAGAAAG (7) 3.3 0.0033 P8 Cb GC CCTGCCTCCT (9) 1.6 0.0016 P8 Cb GC CGATGGTGGG (2) 1.6 0.0016 P8 Cb GC CGTTGGGCTC 1.6 0.0016 Cb medulloblastoma GGGGGGGGTT (9) 4.6 0.0046 Cb medulloblastoma GTGGGGTTTC (3) 2.3 0.0023 P8 GC+1d culture CGTTGGGCTC 4.6 0.0046 P8 GC+1d culture GAGCAGAAAG (7) 2.3 0.0023 P8 GC+1d culture CCTGCCTCCT (9) 1.1 0.0011 P8 GC+1d culture CGATGGTGGG (2) 1.1 0.0011 P8 GC+1d culture GGTGGGGGTT (4) 1.1 0.0011 P8 GC+SHH+1d culture CGATGGTGGG (2) 4.7 0.0047 P8 GC+SHH+1d culture CGTTGGGCTC 3.5 0.0035 P8 GC+SHH+1d culture GAGCAGAAAG (7) 2.3 0.0023 3T3 fibroblasts CGTTGGGCTC 7 0.007 3T3 fibroblasts GGTGGGGGTT (4) 3.5 0.0035 E15 cortex GGTGGGGGTT (4) 9.9 0.0099 E15 cortex CGTTGGGCTC 4.9 0.0049 E15 cortex GTGGGGTTTC (3) 4.9 0.0049 P1 cortex CGATGGTGGG (2) 4.5 0.0045 Hypothalamus GGTGGGGGTT (4) 3.6 0.0036 Hypothalamus CGATGGTGGG (2) 1.8 0.0018 Hypothalamus GAGCAGAAAG (7) 1.8 0.0018 Hypothalamus GGGGGGGGTT (9) 1.8 0.0018 E12.5 retina GTGGGGTTTC (3) 1.9 0.0019 E14.5 retina CCTGCCTCCT (9) 1.8 0.0018 E14.5 retina CGATGGTGGG (2) 1.8 0.0018 E14.5 retina GAGCAGGAGT (2) 1.8 0.0018 E14.5 retina GGTGGGGGTT (4) 1.8 0.0018 E16.5 retina GAGCAGAAAG (7) 5.4 0.0054 E16.5 retina GGTGGGGGTT (4) 3.6 0.0036 E16.5 retina CGATGGTGGG (2) 1.8 0.0018 E18.5 retina GAGCAGAAAG (7) 5.5 0.0055 E18.5 retina CGTTGGGCTC 1.8 0.0018 P0.5 retina CGATGGTGGG (2) 2 0.002 P0.5 retina GGTGGGGGTT (4) 2 0.002 P2.5 retina CGATGGTGGG (2) 3.5 0.0035 P4.5 retina GAGCAGAAAG (7) 5.9 0.0059 P4.5 retina GGTGGGGGTT (4) 4 0.004 P6.5 retina CGATGGTGGG (2) 1.7 0.0017 P6.5 retina GAGCAGAAAG (7) 1.7 0.0017 P6.5 retina GGTGGGGGTT (4) 1.7 0.0017 P10.5 crx- retina GAGCAGAAAG (7) 3.7 0.0037 P10.5 crx- retina CGATGGTGGG (2) 1.9 0.0019 P10.5 crx- retina GGTGGGGGTT (4) 1.9 0.0019 P10.5 crx+ retina GAGCAGAAAG (7) 1.9 0.0019 Adult retinal GGTGGGGGTT (4) 5.6 0.0056 Adult retinal GAGCAGGAGT (2) 3.7 0.0037 Adult retinal CCTGCCTCCT (9) 1.9 0.0019 ONL CGATGGTGGG (2) 1.9 0.0019 ONL CGTTGGGCTC 1.9 0.0019 ONL GGGGGGGGTT (9) 1.9 0.0019