Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1056	Slc1a5	solute carrier family 1 (neutral amino acid transporter), member 5	7		20514
Gene Ontology	carrier activity | dicarboxylic acid transport | integral to membrane | integral to plasma membrane | membrane | neutral amino acid transporter activity | sodium:dicarboxylate symporter activity | symporter activity | transport
Human Homolog	SLC1A5[solute carrier family 1 (neutral amino acid transporter), member 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGACTCACA (25) 14.7 0.0147 P8 Cb GC CAGGAGCTCT (2) 3.3 0.0033 P8 Cb GC GCTTTTAATG (4) 3.3 0.0033 P8 Cb GC AGCGAGGCGG (2) 1.6 0.0016 P8 Cb GC CTGGCTCACA (5) 1.6 0.0016 Cb medulloblastoma GTGACTCACA (25) 25.4 0.0254 Cb medulloblastoma CAGGAGCTCT (2) 4.6 0.0046 P8 GC+1d culture GTGACTCACA (25) 14.8 0.0148 P8 GC+1d culture CTGGCTCACA (5) 2.3 0.0023 P8 GC+1d culture AGCGAGGCGG (2) 1.1 0.0011 P8 GC+1d culture CTCAAAGCCT (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGACTCACA (25) 16.4 0.0164 P8 GC+SHH+1d culture CTGGCTCACA (5) 1.2 0.0012 P8 GC+SHH+1d culture GCCCTAGAGT (2) 1.2 0.0012 3T3 fibroblasts GTGACTCACA (25) 35 0.035 3T3 fibroblasts AGCGAGGCGG (2) 7 0.007 3T3 fibroblasts AGTCTCGAGG 3.5 0.0035 E15 cortex CTGGCTCACA (5) 24.7 0.0247 E15 cortex GTGACTCACA (25) 19.8 0.0198 E15 cortex ACAGAAAAAC (3) 9.9 0.0099 E15 cortex AGCGAGGCGG (2) 4.9 0.0049 P1 cortex GTGACTCACA (25) 13.6 0.0136 P1 cortex CAGGAGCTCT (2) 4.5 0.0045 P1 cortex CTGGCTCACA (5) 4.5 0.0045 P1 cortex GCTTTTAATG (4) 4.5 0.0045 Hypothalamus GTGACTCACA (25) 21.7 0.0217 Hypothalamus AGTCTCGAGG 1.8 0.0018 Hypothalamus ATGACAGTTG (4) 1.8 0.0018 Hypothalamus GCAGTGATCC 1.8 0.0018 E12.5 retina GTGACTCACA (25) 35.7 0.0357 E12.5 retina AGTCTCGAGG 3.8 0.0038 E12.5 retina CAGGAGCTCT (2) 3.8 0.0038 E12.5 retina CTGGCTCACA (5) 3.8 0.0038 E12.5 retina CTCAAAGCCT (2) 1.9 0.0019 E14.5 retina GTGACTCACA (25) 45.5 0.0455 E14.5 retina CTGGCTCACA (5) 5.5 0.0055 E14.5 retina AGTCTCGAGG 1.8 0.0018 E14.5 retina CAGGAGCTCT (2) 1.8 0.0018 E14.5 retina GATGGGAAGG (4) 1.8 0.0018 E14.5 retina GCCCTAGAGT (2) 1.8 0.0018 E16.5 retina GTGACTCACA (25) 29 0.029 E16.5 retina AGTCTCGAGG 3.6 0.0036 E16.5 retina CAGGAGCTCT (2) 3.6 0.0036 E16.5 retina GATGGGAAGG (4) 3.6 0.0036 E16.5 retina CTCAAAGCCT (2) 1.8 0.0018 E16.5 retina CTGGCTCACA (5) 1.8 0.0018 E16.5 retina GCTTTTAATG (4) 1.8 0.0018 E18.5 retina GTGACTCACA (25) 27.3 0.0273 E18.5 retina ACAGAAAAAC (3) 1.8 0.0018 E18.5 retina AGTCTCGAGG 1.8 0.0018 E18.5 retina CAGGAGCTCT (2) 1.8 0.0018 E18.5 retina CTGGCTCACA (5) 1.8 0.0018 E18.5 retina GATGGGAAGG (4) 1.8 0.0018 P0.5 retina GTGACTCACA (25) 29.4 0.0294 P0.5 retina AGTCTCGAGG 3.9 0.0039 P0.5 retina ATGACAGTTG (4) 2 0.002 P0.5 retina CTGGCTCACA (5) 2 0.002 P0.5 retina GCAGTGATCC 2 0.002 P2.5 retina GTGACTCACA (25) 24.6 0.0246 P2.5 retina CAGGAGCTCT (2) 5.3 0.0053 P2.5 retina CTCAAAGCCT (2) 3.5 0.0035 P2.5 retina GCCCTAGAGT (2) 3.5 0.0035 P2.5 retina AGTCTCGAGG 1.8 0.0018 P4.5 retina GTGACTCACA (25) 27.7 0.0277 P4.5 retina AGTCTCGAGG 2 0.002 P4.5 retina GCCCTAGAGT (2) 2 0.002 P6.5 retina GTGACTCACA (25) 26.7 0.0267 P6.5 retina AGTCTCGAGG 1.7 0.0017 P6.5 retina ATGACAGTTG (4) 1.7 0.0017 P6.5 retina CAGGAGCTCT (2) 1.7 0.0017 P6.5 retina CTGGCTCACA (5) 1.7 0.0017 P10.5 crx- retina GTGACTCACA (25) 26 0.026 P10.5 crx- retina CAGGAGCTCT (2) 3.7 0.0037 P10.5 crx- retina CTGGCTCACA (5) 3.7 0.0037 P10.5 crx- retina AGTCTCGAGG 1.9 0.0019 P10.5 crx- retina GATGGGAAGG (4) 1.9 0.0019 P10.5 crx+ retina GTGACTCACA (25) 30.8 0.0308 P10.5 crx+ retina CAGGAGCTCT (2) 5.8 0.0058 Adult retinal GTGACTCACA (25) 33.3 0.0333 Adult retinal CTGGCTCACA (5) 3.7 0.0037 Adult retinal GCAGTGATCC 3.7 0.0037 Adult retinal AGCGAGGCGG (2) 1.9 0.0019 Adult retinal AGTCTCGAGG 1.9 0.0019 Adult retinal GATGGGAAGG (4) 1.9 0.0019 ONL GTGACTCACA (25) 34.5 0.0345