Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.10762
Tcap
titin-cap
11
21393
Gene Ontology
protein binding
|
sarcomere organization
|
Z disc
Human Homolog
TCAP[titin-cap (telethonin)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TTCTCAGAAG (
6
)
3.3
0.0033
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TTCTCAGAAG (
6
)
2.3
0.0023
P8 GC+1d culture
GACTGTGTGA (
3
)
1.1
0.0011
P8 GC+1d culture
TCTCAGGAAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GACTGTGTGA (
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TTCTCAGAAG (
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GACTGTGTGA (
3
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TTCTCAGAAG (
6
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TTCTCAGAAG (
6
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TCCCTCCCTC (
5
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GACTGTGTGA (
3
)
3.6
0.0036
E18.5 retina
TTCTCAGAAG (
6
)
3.6
0.0036
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TCTCAGGAAG
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GACTGTGTGA (
3
)
1.8
0.0018
P2.5 retina
TTCTCAGAAG (
6
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TCTCAGGAAG
(
2
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GACTGTGTGA (
3
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TCCCTCCCTC (
5
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TTCTCAGAAG (
6
)
1.9
0.0019
