Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10800	Kcnk1	potassium channel, subfamily K, member 1	8	8 E2	16525
Gene Ontology	integral to membrane | integral to plasma membrane | ion channel activity | ion transport | membrane | potassium channel activity | potassium ion transport | transport | voltage-gated ion channel activity
Human Homolog	KCNK1[potassium channel, subfamily K, member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 16 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGATGGCA (3) 19.6 0.0196 P8 Cb GC GCCTGCTGTG (6) 6.5 0.0065 P8 Cb GC CTGGGAGGCC (4) 1.6 0.0016 P8 Cb GC TGCCTATCCA (2) 1.6 0.0016 Cb medulloblastoma GCAGATGGCA (3) 94.8 0.0948 Cb medulloblastoma GCAGATGAAA (3) 2.3 0.0023 Cb medulloblastoma GCCTGCTGTG (6) 2.3 0.0023 Cb medulloblastoma TGCCTATCCA (2) 2.3 0.0023 P8 GC+1d culture GCAGATGGCA (3) 44.5 0.0445 P8 GC+1d culture GCCTGCTGTG (6) 4.6 0.0046 P8 GC+1d culture GCAGATGAAA (3) 3.4 0.0034 P8 GC+1d culture TGCCTATCCA (2) 3.4 0.0034 P8 GC+1d culture ATTTTATTGA (10) 2.3 0.0023 P8 GC+SHH+1d culture GCAGATGGCA (3) 45.7 0.0457 P8 GC+SHH+1d culture GCCTGCTGTG (6) 3.5 0.0035 P8 GC+SHH+1d culture ATTTTATTGA (10) 2.3 0.0023 P8 GC+SHH+1d culture TGCCTATCCA (2) 2.3 0.0023 P8 GC+SHH+1d culture GCAGATGAAA (3) 1.2 0.0012 3T3 fibroblasts GCCTGCTGTG (6) 14 0.014 E15 cortex CTGGGAGGCC (4) 4.9 0.0049 E15 cortex GCAGATGAAA (3) 4.9 0.0049 E15 cortex GGAGGCACAG (2) 4.9 0.0049 Hypothalamus GCAGATGGCA (3) 27.2 0.0272 Hypothalamus GCAGATGAAA (3) 1.8 0.0018 E12.5 retina GCAGATGGCA (3) 9.4 0.0094 E12.5 retina ATTTTATTGA (10) 1.9 0.0019 E14.5 retina GGAGGCACAG (2) 3.6 0.0036 E14.5 retina GCAGATGAAA (3) 1.8 0.0018 E14.5 retina GCAGATGGCA (3) 1.8 0.0018 E16.5 retina GCAGATGGCA (3) 9.1 0.0091 E16.5 retina GGAGGCACAG (2) 1.8 0.0018 E18.5 retina GCAGATGGCA (3) 41.8 0.0418 E18.5 retina GCCTGCTGTG (6) 3.6 0.0036 E18.5 retina GCAGATGAAA (3) 1.8 0.0018 P0.5 retina GCAGATGGCA (3) 5.9 0.0059 P0.5 retina GCAGATGAAA (3) 2 0.002 P0.5 retina GCCTGCTGTG (6) 2 0.002 P2.5 retina GCCTGCTGTG (6) 3.5 0.0035 P2.5 retina GCAGATGAAA (3) 1.8 0.0018 P2.5 retina GCAGATGGCA (3) 1.8 0.0018 P4.5 retina GCAGATGGCA (3) 5.9 0.0059 P4.5 retina GGAGGCACAG (2) 5.9 0.0059 P4.5 retina GCCTGCTGTG (6) 4 0.004 P4.5 retina ATTTTATTGA (10) 2 0.002 P4.5 retina CTGGGAGGCC (4) 2 0.002 P6.5 retina GCAGATGAAA (3) 3.3 0.0033 P6.5 retina GCAGATGGCA (3) 3.3 0.0033 P6.5 retina GCCTGCTGTG (6) 3.3 0.0033 P6.5 retina GGAGGCACAG (2) 3.3 0.0033 P6.5 retina ATTTTATTGA (10) 1.7 0.0017 P10.5 crx- retina GCCTGCTGTG (6) 3.7 0.0037 P10.5 crx- retina GCAGATGGCA (3) 1.9 0.0019 P10.5 crx+ retina GCAGATGGCA (3) 13.5 0.0135 P10.5 crx+ retina GCTGGTGGTC (3) 1.9 0.0019 Adult retinal GCAGATGGCA (3) 9.3 0.0093 Adult retinal GCCTGCTGTG (6) 1.9 0.0019 ONL GCTGGTGGTC (3) 3.8 0.0038 ONL GCCTGCTGTG (6) 1.9 0.0019