Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1090	Gpx1	glutathione peroxidase 1	9	9 57.0 cM	14775
Gene Ontology	glutathione peroxidase activity | glutathione peroxidase activity | induction of apoptosis by oxidative stress | mitochondrion | oxidoreductase activity | peroxidase activity | response to oxidative stress | response to reactive oxygen species
Human Homolog	GPX1[glutathione peroxidase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGTGTTTC (3) 9.8 0.0098 P8 Cb GC AAGACACTTC (5) 6.5 0.0065 P8 Cb GC ATGGTGGTTC (2) 1.6 0.0016 P8 Cb GC TGTCCAGGAG (3) 1.6 0.0016 Cb medulloblastoma ATGGTGGTTC (2) 13.9 0.0139 Cb medulloblastoma ATGGTGTTTC (3) 6.9 0.0069 Cb medulloblastoma TGTCCAGGAG (3) 4.6 0.0046 Cb medulloblastoma AGCGCAGTGG (7) 2.3 0.0023 Cb medulloblastoma GAAAAACCGC (2) 2.3 0.0023 Cb medulloblastoma GAAGAACCGC (2) 2.3 0.0023 P8 GC+1d culture ATGGTGTTTC (3) 8 0.008 P8 GC+1d culture AAGACACTTC (5) 2.3 0.0023 P8 GC+1d culture ATGGCGTTTC (4) 2.3 0.0023 P8 GC+1d culture ATGGTGGTTC (2) 2.3 0.0023 P8 GC+1d culture GAAGGGGGTT (3) 1.1 0.0011 P8 GC+1d culture TGAGCCTGTG (2) 1.1 0.0011 P8 GC+1d culture TGTCCAGGAG (3) 1.1 0.0011 P8 GC+SHH+1d culture ATGGTGTTTC (3) 11.7 0.0117 P8 GC+SHH+1d culture TGTCCAGGAG (3) 8.2 0.0082 P8 GC+SHH+1d culture AAGACACTTC (5) 3.5 0.0035 P8 GC+SHH+1d culture ATGGTGGTTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCCTGGAACT (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGGCTTGGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGGGGGTGG (12) 1.2 0.0012 3T3 fibroblasts ATGGTGTTTC (3) 52.6 0.0526 3T3 fibroblasts AATGGGTGTT 3.5 0.0035 3T3 fibroblasts ATGGTGGTTC (2) 3.5 0.0035 3T3 fibroblasts GGGGCTTGGG (5) 3.5 0.0035 3T3 fibroblasts GGGGGGGTGG (12) 3.5 0.0035 E15 cortex GGGGCTTGGG (5) 14.8 0.0148 E15 cortex AATGGTGTTT 9.9 0.0099 E15 cortex ATGGTGGTTC (2) 4.9 0.0049 E15 cortex ATGGTGTTTC (3) 4.9 0.0049 E15 cortex GAAGGGGGTT (3) 4.9 0.0049 E15 cortex TGTCCAGGAG (3) 4.9 0.0049 P1 cortex AAGACACTTC (5) 4.5 0.0045 P1 cortex ATGGTGTTTC (3) 4.5 0.0045 P1 cortex GGGGCTTGGG (5) 4.5 0.0045 P1 cortex TGTCCAGGAG (3) 4.5 0.0045 Hypothalamus ATGGTGTTTC (3) 5.4 0.0054 Hypothalamus AGCGCAGTGG (7) 3.6 0.0036 Hypothalamus ATGGTGGTTC (2) 1.8 0.0018 Hypothalamus GAAAAACCGC (2) 1.8 0.0018 Hypothalamus GAAGAACCGC (2) 1.8 0.0018 Hypothalamus GCCTGGAACT (3) 1.8 0.0018 Hypothalamus TTAAAATTCC (3) 1.8 0.0018 E12.5 retina ATGGTGTTTC (3) 15 0.015 E12.5 retina GGGGCTTGGG (5) 3.8 0.0038 E12.5 retina AAAAGGCAAG (3) 1.9 0.0019 E12.5 retina ATGGCGTTTC (4) 1.9 0.0019 E12.5 retina GGGGGGGTGG (12) 1.9 0.0019 E12.5 retina TGTCCAGGAG (3) 1.9 0.0019 E14.5 retina AATGGGTGTT 12.8 0.0128 E14.5 retina AAGACACTTC (5) 9.1 0.0091 E14.5 retina ATGGTGTTTC (3) 3.6 0.0036 E14.5 retina TGAGCCTGTG (2) 3.6 0.0036 E14.5 retina GAAAAACCGC (2) 1.8 0.0018 E14.5 retina TGTCCAGGAG (3) 1.8 0.0018 E16.5 retina AAGACACTTC (5) 7.2 0.0072 E16.5 retina ATGGTGTTTC (3) 5.4 0.0054 E16.5 retina TGTCCAGGAG (3) 3.6 0.0036 E16.5 retina AAAAGGCAAG (3) 1.8 0.0018 E16.5 retina AATGGGTGTT 1.8 0.0018 E16.5 retina AGCGCAGTGG (7) 1.8 0.0018 E16.5 retina GGGGCTTGGG (5) 1.8 0.0018 E18.5 retina AAGACACTTC (5) 9.1 0.0091 E18.5 retina ATGGTGTTTC (3) 7.3 0.0073 E18.5 retina GAAAAACCGC (2) 1.8 0.0018 P0.5 retina AAAAGGCAAG (3) 3.9 0.0039 P0.5 retina ATGGTGTTTC (3) 3.9 0.0039 P0.5 retina AATGGTGTTT 2 0.002 P0.5 retina AGCGCAGTGG (7) 2 0.002 P0.5 retina GGGGCTTGGG (5) 2 0.002 P0.5 retina TGTCCAGGAG (3) 2 0.002 P2.5 retina ATGGTGTTTC (3) 8.8 0.0088 P2.5 retina AAGACACTTC (5) 3.5 0.0035 P2.5 retina GAAGGGGGTT (3) 1.8 0.0018 P2.5 retina GGGGCTTGGG (5) 1.8 0.0018 P2.5 retina TGTCCAGGAG (3) 1.8 0.0018 P4.5 retina ATGGTGTTTC (3) 7.9 0.0079 P4.5 retina AAGACACTTC (5) 4 0.004 P4.5 retina ATGGTGGTTC (2) 2 0.002 P4.5 retina GAAAAACCGC (2) 2 0.002 P4.5 retina GGGGCTTGGG (5) 2 0.002 P4.5 retina TGTCCAGGAG (3) 2 0.002 P6.5 retina AAGACACTTC (5) 1.7 0.0017 P6.5 retina ATGGTGGTTC (2) 1.7 0.0017 P6.5 retina ATGGTGTTTC (3) 1.7 0.0017 P6.5 retina GAAGAACCGC (2) 1.7 0.0017 P10.5 crx- retina ATGGTGTTTC (3) 18.6 0.0186 P10.5 crx- retina ATGGTGGTTC (2) 3.7 0.0037 P10.5 crx- retina AAGACACTTC (5) 1.9 0.0019 P10.5 crx- retina TGTCCAGGAG (3) 1.9 0.0019 P10.5 crx+ retina ATGGTGTTTC (3) 7.7 0.0077 P10.5 crx+ retina AAGACACTTC (5) 5.8 0.0058 P10.5 crx+ retina ATGGTGGTTC (2) 1.9 0.0019 P10.5 crx+ retina TGTCCAGGAG (3) 1.9 0.0019 Adult retinal ATGGTGGTTC (2) 5.6 0.0056 Adult retinal ATGGTGTTTC (3) 5.6 0.0056 Adult retinal TGTCCAGGAG (3) 3.7 0.0037 Adult retinal AAAAGGCAAG (3) 1.9 0.0019 Adult retinal AAGACACTTC (5) 1.9 0.0019 ONL ATGGTGTTTC (3) 5.7 0.0057 ONL TGTCCAGGAG (3) 3.8 0.0038 ONL TTAAAATTCC (3) 3.8 0.0038 ONL AATGGGTGTT 1.9 0.0019 ONL AGCGCAGTGG (7) 1.9 0.0019 ONL ATGGTGGTTC (2) 1.9 0.0019 ONL GCCTGGAACT (3) 1.9 0.0019