Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10987	Limd1	LIM domains containing 1	9	9 70.7 cM	29806
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	LIMD1[LIM domains containing 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 GC+1d culture ATCTCACTCA 1.1 0.0011 P8 GC+1d culture TGTTTTCAAA (3) 1.1 0.0011 P8 GC+SHH+1d culture ACTTCACTTG (4) 2.3 0.0023 P8 GC+SHH+1d culture ATCTCACTCA 2.3 0.0023 P8 GC+SHH+1d culture TGAATGTGGA (3) 2.3 0.0023 P8 GC+SHH+1d culture TGTTTTCAAA (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGAGATCTCT 3.5 0.0035 E15 cortex GTCATAGCTG (590) 4.9 0.0049 Hypothalamus CTGTGCCTCT 3.6 0.0036 Hypothalamus ACTTCACTTG (4) 1.8 0.0018 E12.5 retina ACTTCACTTG (4) 1.9 0.0019 E12.5 retina ATCTCACTCA 1.9 0.0019 E12.5 retina GAGGCTCTGG (11) 1.9 0.0019 E14.5 retina ATCTCACTCA 7.3 0.0073 E14.5 retina ACTTCACTTG (4) 3.6 0.0036 E14.5 retina GAGGCTCTGG (11) 1.8 0.0018 E14.5 retina TGAATGTGGA (3) 1.8 0.0018 E16.5 retina ATCTCACTCA 5.4 0.0054 E16.5 retina ACTTCACTTG (4) 1.8 0.0018 E18.5 retina GGCTTGTCCA (2) 1.8 0.0018 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ATCTCACTCA 2 0.002 P2.5 retina GAGGCTCTGG (11) 5.3 0.0053 P2.5 retina ATCTCACTCA 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ATCTCACTCA 5.9 0.0059 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TGTTTTCAAA (3) 2 0.002 P6.5 retina GAGGCTCTGG (11) 3.3 0.0033 P6.5 retina GGCTTGTCCA (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TGAATGTGGA (3) 1.7 0.0017 P10.5 crx- retina ACTTCACTTG (4) 7.4 0.0074 P10.5 crx- retina GGAGATCTCT 1.9 0.0019 P10.5 crx+ retina TGAATGTGGA (3) 1.9 0.0019 Adult retinal CTGTGCCTCT 3.7 0.0037 Adult retinal GAGGCTCTGG (11) 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TGTTTTCAAA (3) 3.8 0.0038 ONL ACTTCACTTG (4) 1.9 0.0019 ONL CTGTGCCTCT 1.9 0.0019 ONL GGAGATCTCT 1.9 0.0019 ONL GGCTTGTCCA (2) 1.9 0.0019 ONL TGAATGTGGA (3) 1.9 0.0019