Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.111928
6230425F05Rik
RIKEN cDNA 6230425F05 gene
18
225659
Human Homolog
C18orf9[chromosome 18 open reading frame 9]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGATGCTGG (
15
)
13.1
0.0131
Cb medulloblastoma
GTGGTGCACA (
18
)
4.6
0.0046
Cb medulloblastoma
TGGATGCTGG (
15
)
4.6
0.0046
Cb medulloblastoma
TATGTGCTTA
(
3
)
2.3
0.0023
P8 GC+1d culture
TGGATGCTGG (
15
)
8
0.008
P8 GC+1d culture
CTAGGCAAAC
(
7
)
2.3
0.0023
P8 GC+1d culture
GTGGTGCACA (
18
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGTGCACA (
18
)
4.7
0.0047
P8 GC+SHH+1d culture
TGGATGCTGG (
15
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGACTCAGG (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CTAGGCAAAC
(
7
)
1.2
0.0012
3T3 fibroblasts
GTGGTGCACA (
18
)
14
0.014
3T3 fibroblasts
CTAGGCAAAC
(
7
)
3.5
0.0035
3T3 fibroblasts
TGGATGCTGG (
15
)
3.5
0.0035
E15 cortex
GTGGTGCACA (
18
)
24.7
0.0247
E15 cortex
TGGATGCTGG (
15
)
14.8
0.0148
E15 cortex
CAGACTCAGG (
3
)
4.9
0.0049
E15 cortex
CTAGGCAAAC
(
7
)
4.9
0.0049
P1 cortex
GTGGTGCACA (
18
)
13.6
0.0136
P1 cortex
CTAGGCAAAC
(
7
)
9.1
0.0091
Hypothalamus
TGGATGCTGG (
15
)
5.4
0.0054
Hypothalamus
GTGGTGCACA (
18
)
3.6
0.0036
E12.5 retina
TGGATGCTGG (
15
)
5.6
0.0056
E12.5 retina
GTGGTGCACA (
18
)
3.8
0.0038
E14.5 retina
TGGATGCTGG (
15
)
18.2
0.0182
E14.5 retina
GTGGTGCACA (
18
)
7.3
0.0073
E14.5 retina
CAGACTCAGG (
3
)
1.8
0.0018
E16.5 retina
TGGATGCTGG (
15
)
30.8
0.0308
E16.5 retina
GTGGTGCACA (
18
)
3.6
0.0036
E16.5 retina
CAGACTCAGG (
3
)
1.8
0.0018
E18.5 retina
GTGGTGCACA (
18
)
3.6
0.0036
E18.5 retina
CTAGGCAAAC
(
7
)
1.8
0.0018
E18.5 retina
TATGTGCTTA
(
3
)
1.8
0.0018
E18.5 retina
TGGATGCTGG (
15
)
1.8
0.0018
P0.5 retina
TGGATGCTGG (
15
)
7.9
0.0079
P0.5 retina
GTGGTGCACA (
18
)
3.9
0.0039
P0.5 retina
TATGTGCTTA
(
3
)
2
0.002
P2.5 retina
TGGATGCTGG (
15
)
15.8
0.0158
P2.5 retina
GTGGTGCACA (
18
)
7
0.007
P2.5 retina
CTAGGCAAAC
(
7
)
3.5
0.0035
P4.5 retina
TGGATGCTGG (
15
)
5.9
0.0059
P4.5 retina
GTGGTGCACA (
18
)
4
0.004
P4.5 retina
CAGACTCAGG (
3
)
2
0.002
P6.5 retina
TGGATGCTGG (
15
)
6.7
0.0067
P6.5 retina
GTGGTGCACA (
18
)
5
0.005
P6.5 retina
CAGACTCAGG (
3
)
1.7
0.0017
P10.5 crx- retina
TGGATGCTGG (
15
)
5.6
0.0056
P10.5 crx+ retina
GTGGTGCACA (
18
)
5.8
0.0058
P10.5 crx+ retina
TGGATGCTGG (
15
)
5.8
0.0058
P10.5 crx+ retina
CAGACTCAGG (
3
)
3.8
0.0038
Adult retinal
GTGGTGCACA (
18
)
9.3
0.0093
Adult retinal
TGGATGCTGG (
15
)
5.6
0.0056
ONL
GTGGTGCACA (
18
)
11.5
0.0115
ONL
CAGACTCAGG (
3
)
1.9
0.0019
