Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1131	Npdc1	neural proliferation, differentiation and control gene 1	2	2 A3	18146
Gene Ontology	cell growth and/or maintenance | extracellular space | integral to membrane
Human Homolog	NPDC1[neural proliferation, differentiation and control, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 61 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATAGAGAGT 27.7 0.0277 P8 Cb GC CCTTCAGTCC (5) 3.3 0.0033 P8 Cb GC CCTTCAATCC (8) 1.6 0.0016 Cb medulloblastoma GATAGAGAGT 60.1 0.0601 Cb medulloblastoma CCTGGGCTCT (3) 2.3 0.0023 Cb medulloblastoma CCTTCAATCC (8) 2.3 0.0023 P8 GC+1d culture GATAGAGAGT 37.7 0.0377 P8 GC+1d culture CCTTCAGTCC (5) 5.7 0.0057 P8 GC+1d culture CCTTCAATCC (8) 1.1 0.0011 P8 GC+1d culture CCTTTCAGTC (7) 1.1 0.0011 P8 GC+SHH+1d culture GATAGAGAGT 32.8 0.0328 P8 GC+SHH+1d culture CCTTCAGTCC (5) 4.7 0.0047 P8 GC+SHH+1d culture CCTTCAATCC (8) 3.5 0.0035 3T3 fibroblasts CCTTCAATCC (8) 10.5 0.0105 3T3 fibroblasts CCTTTCAGTC (7) 3.5 0.0035 E15 cortex GATAGAGAGT 4.9 0.0049 P1 cortex GATAGAGAGT 18.2 0.0182 P1 cortex CCTGGGCTCT (3) 4.5 0.0045 Hypothalamus GATAGAGAGT 16.3 0.0163 Hypothalamus CCTGGGCTCT (3) 1.8 0.0018 Hypothalamus CCTTCAATCC (8) 1.8 0.0018 E12.5 retina CCTTCAGTCC (5) 3.8 0.0038 E12.5 retina CCTTCAATCC (8) 1.9 0.0019 E12.5 retina CCTTTCAGTC (7) 1.9 0.0019 E12.5 retina GAAACCAAGA (5) 1.9 0.0019 E12.5 retina GATAGAGAGT 1.9 0.0019 E14.5 retina GATAGAGAGT 16.4 0.0164 E14.5 retina CCTGGGCTCT (3) 3.6 0.0036 E14.5 retina CCTTCAATCC (8) 1.8 0.0018 E14.5 retina CCTTTCAGTC (7) 1.8 0.0018 E16.5 retina GATAGAGAGT 30.8 0.0308 E16.5 retina CCTTCAATCC (8) 1.8 0.0018 E18.5 retina GATAGAGAGT 3.6 0.0036 E18.5 retina CCTTCAATCC (8) 1.8 0.0018 E18.5 retina TGCAACAATA (4) 1.8 0.0018 P0.5 retina GATAGAGAGT 7.9 0.0079 P0.5 retina CCTTCAGTCC (5) 3.9 0.0039 P0.5 retina CCTGGGCTCT (3) 2 0.002 P0.5 retina CCTTCAATCC (8) 2 0.002 P2.5 retina GATAGAGAGT 37 0.037 P2.5 retina CCTTCAGTCC (5) 5.3 0.0053 P4.5 retina GATAGAGAGT 31.7 0.0317 P6.5 retina GATAGAGAGT 35 0.035 P6.5 retina CCTTCAATCC (8) 3.3 0.0033 P6.5 retina CCTTCAGTCC (5) 1.7 0.0017 P6.5 retina TGCAACAATA (4) 1.7 0.0017 P10.5 crx- retina GATAGAGAGT 35.3 0.0353 P10.5 crx- retina CCTTCAATCC (8) 3.7 0.0037 P10.5 crx- retina TGCAACAATA (4) 3.7 0.0037 P10.5 crx- retina GAAACCAAGA (5) 1.9 0.0019 P10.5 crx+ retina GATAGAGAGT 13.5 0.0135 P10.5 crx+ retina TGCAACAATA (4) 3.8 0.0038 P10.5 crx+ retina CCTGGGCTCT (3) 1.9 0.0019 P10.5 crx+ retina CCTTCAATCC (8) 1.9 0.0019 P10.5 crx+ retina CCTTCAGTCC (5) 1.9 0.0019 P10.5 crx+ retina CCTTTCAGTC (7) 1.9 0.0019 Adult retinal CCTTCAATCC (8) 7.4 0.0074 Adult retinal GATAGAGAGT 3.7 0.0037 ONL GATAGAGAGT 5.7 0.0057 ONL CCTTCAGTCC (5) 1.9 0.0019 ONL GAAACCAAGA (5) 1.9 0.0019