Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.11473
BC008163
cDNA sequence BC008163
4
230789
Human Homolog
MGC34648[hypothetical protein MGC34648]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATTAAAAAA
ATTTAAAAAA
(
3
)
CTGAGCGGTT
TAATTGAGTA
8.1
0.0081
Cb medulloblastoma
AATTAAAAAA
ATTTAAAAAA
(
3
)
TAATTGAGTA
9.2
0.0092
P8 GC+1d culture
AATTAAAAAA
ATTTAAAAAA
(
3
)
TAATTGAGTA
3.3
0.0033
P8 GC+SHH+1d culture
AATTAAAAAA
ATTTAAAAAA
(
3
)
TAATTGAGTA
3.6
0.0036
3T3 fibroblasts
CTGAGCGGTT
10.5
0.0105
P1 cortex
ATTTAAAAAA
(
3
)
9.1
0.0091
Hypothalamus
ATTTAAAAAA
(
3
)
TAATTGAGTA
3.6
0.0036
E12.5 retina
ATTTAAAAAA
(
3
)
CTGAGCGGTT
3.8
0.0038
E14.5 retina
ATTTAAAAAA
(
3
)
TAATTGAGTA
9.1
0.0091
E16.5 retina
AATTAAAAAA
CTGAGCGGTT
TAATTGAGTA
7.2
0.0072
E18.5 retina
ATTTAAAAAA
(
3
)
1.8
0.0018
P0.5 retina
CTGAGCGGTT
2
0.002
P2.5 retina
CTGAGCGGTT
TAATTGAGTA
3.6
0.0036
P4.5 retina
ATTTAAAAAA
(
3
)
TAATTGAGTA
6
0.006
P6.5 retina
ATTTAAAAAA
(
3
)
TAATTGAGTA
3.4
0.0034
P10.5 crx- retina
TAATTGAGTA
1.9
0.0019
P10.5 crx+ retina
ATTTAAAAAA
(
3
)
CTGAGCGGTT
3.8
0.0038
ONL
AATTAAAAAA
ATTTAAAAAA
(
3
)
5.7
0.0057
