Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1149	Irf2	interferon regulatory factor 2	8		16363
Gene Ontology	DNA binding | immune response | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	IRF2[interferon regulatory factor 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCAATCAA (2) 4.9 0.0049 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GGAAGGCCAA (3) 1.6 0.0016 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TAGCAATCAA (2) 4.6 0.0046 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TAGCAATCAA (2) 2.3 0.0023 P8 GC+SHH+1d culture AGCTCATAAA 1.2 0.0012 P8 GC+SHH+1d culture GGAAGGCCAA (3) 1.2 0.0012 E15 cortex TAGCAATCAA (2) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus TAGCAATCAA (2) 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TAGCAATCAA (2) 3.6 0.0036 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TAGCAATCAA (2) 7.3 0.0073 E18.5 retina AGCTCATAAA 1.8 0.0018 E18.5 retina GGAAGGCCAA (3) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina TAGCAATCAA (2) 5.9 0.0059 P2.5 retina TTTTTTTTTT (433) 7 0.007 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina AGCTCATAAA 4 0.004 P4.5 retina TAGCAATCAA (2) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina AGCTCATAAA 1.7 0.0017 P10.5 crx- retina AGCTCATAAA 1.9 0.0019 P10.5 crx+ retina TAGCAATCAA (2) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal TAGCAATCAA (2) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038