Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1155	Tuba4	tubulin, alpha 4	1	1 C4	22145
Gene Ontology	GTP binding | microtubule | microtubule-based movement | microtubule-based process | structural constituent of cytoskeleton | structural molecule activity
Human Homolog	TUBA1[tubulin, alpha 1 (testis specific)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCCCCGGGC (3) 21.2 0.0212 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 P8 Cb GC CTATTAAAAG (4) 1.6 0.0016 P8 Cb GC CTGAGCAACA (4) 1.6 0.0016 P8 Cb GC GCTCCAGCCC (3) 1.6 0.0016 P8 Cb GC GGATTCAGCC (2) 1.6 0.0016 P8 Cb GC TAGCGCGCCC (35) 1.6 0.0016 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma CTATTAAAAG (4) 11.6 0.0116 Cb medulloblastoma TGCCCCGGGC (3) 9.2 0.0092 Cb medulloblastoma CAAGGAGACT (2) 2.3 0.0023 Cb medulloblastoma GCTCCAGCCC (3) 2.3 0.0023 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture CTGAGCAACA (4) 2.3 0.0023 P8 GC+1d culture TAGCGCGCCC (35) 1.1 0.0011 P8 GC+1d culture TGCCCCGGGC (3) 1.1 0.0011 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture CTGAGCAACA (4) 4.7 0.0047 P8 GC+SHH+1d culture GCCCTGTTGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGCCCCGGGC (3) 1.2 0.0012 P8 GC+SHH+1d culture TGGACCTGAC (3) 1.2 0.0012 3T3 fibroblasts CTGAGCAACA (4) 3.5 0.0035 3T3 fibroblasts GCTGTGCCTG (7) 3.5 0.0035 3T3 fibroblasts TAGCGCGCCC (35) 3.5 0.0035 E15 cortex TGCCCCGGGC (3) 19.8 0.0198 E15 cortex CTGAGCAACA (4) 4.9 0.0049 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 P1 cortex TGCCCCGGGC (3) 4.5 0.0045 Hypothalamus CTGAGCAACA (4) 9.1 0.0091 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus AAGCAAGAGC 3.6 0.0036 Hypothalamus CAAGGAGACT (2) 3.6 0.0036 Hypothalamus CTATTAAAAG (4) 3.6 0.0036 Hypothalamus TGCCCCGGGC (3) 3.6 0.0036 Hypothalamus GCTCCAGCCC (3) 1.8 0.0018 Hypothalamus TGGACCTGAC (3) 1.8 0.0018 E12.5 retina CTGAGCAACA (4) 3.8 0.0038 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E12.5 retina GCTGTGCCTG (7) 1.9 0.0019 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina CTGAGCAACA (4) 3.6 0.0036 E14.5 retina TGCCCCGGGC (3) 3.6 0.0036 E14.5 retina AAGCAAGAGC 1.8 0.0018 E14.5 retina CAAGGAGACT (2) 1.8 0.0018 E14.5 retina GCTCCAGCCC (3) 1.8 0.0018 E14.5 retina GCTGTGCCTG (7) 1.8 0.0018 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina TGCCCCGGGC (3) 5.4 0.0054 E16.5 retina CTGAGCAACA (4) 3.6 0.0036 E16.5 retina CAAGGAGACT (2) 1.8 0.0018 E16.5 retina GCTCCAGCCC (3) 1.8 0.0018 E16.5 retina GCTGTGCCTG (7) 1.8 0.0018 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina TGCCCCGGGC (3) 3.6 0.0036 E18.5 retina TTGGACTGAC (2) 1.8 0.0018 P0.5 retina CTGAGCAACA (4) 3.9 0.0039 P0.5 retina GCCCTGTTGC (3) 3.9 0.0039 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina TGCCCCGGGC (3) 2 0.002 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina CAAGGAGACT (2) 1.8 0.0018 P2.5 retina CTGAGCAACA (4) 1.8 0.0018 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina CAAGGAGACT (2) 2 0.002 P4.5 retina CTGAGCAACA (4) 2 0.002 P4.5 retina GCTGACAGTG (5) 2 0.002 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina CTGAGCAACA (4) 6.7 0.0067 P6.5 retina TGGACCTGAC (3) 3.3 0.0033 P6.5 retina CAAGGAGACT (2) 1.7 0.0017 P6.5 retina GCTGACAGTG (5) 1.7 0.0017 P6.5 retina TGCCCCGGGC (3) 1.7 0.0017 P6.5 retina TTGGACTGAC (2) 1.7 0.0017 P10.5 crx- retina CTGAGCAACA (4) 9.3 0.0093 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx- retina TGCCCCGGGC (3) 3.7 0.0037 P10.5 crx- retina GCTGACAGTG (5) 1.9 0.0019 P10.5 crx- retina GGATTCAGCC (2) 1.9 0.0019 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 P10.5 crx+ retina CTATTAAAAG (4) 1.9 0.0019 P10.5 crx+ retina TGGACCTGAC (3) 1.9 0.0019 Adult retinal GCTGACAGTG (5) 5.6 0.0056 Adult retinal CTATTAAAAG (4) 3.7 0.0037 Adult retinal GGATTCAGCC (2) 3.7 0.0037 Adult retinal GCTCCAGCCC (3) 1.9 0.0019 Adult retinal TGCCCCGGGC (3) 1.9 0.0019 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL GCTCCAGCCC (3) 1.9 0.0019 ONL GCTGACAGTG (5) 1.9 0.0019 ONL TGCCCCGGGC (3) 1.9 0.0019