Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116418	A730008L03Rik	RIKEN cDNA A730008L03 gene	2		58202
Gene Ontology	nucleus | regulation of transcription, DNA-dependent
Human Homolog	COBRA1[cofactor of BRCA1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAACTGAGA 1.6 0.0016 Cb medulloblastoma GACTCAGCTC (3) 4.6 0.0046 Cb medulloblastoma CTAACTGAGA 2.3 0.0023 P8 GC+1d culture CTAACTGAGA 5.7 0.0057 P8 GC+1d culture GACTCACTCA (3) 3.4 0.0034 P8 GC+1d culture GGCTGGGGGA (3) 1.1 0.0011 P8 GC+1d culture TCTTTGGCAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CTAACTGAGA 4.7 0.0047 P8 GC+SHH+1d culture GACTCAGCTC (3) 1.2 0.0012 3T3 fibroblasts CTAACTGAGA 7 0.007 E15 cortex CTAACTGAGA 4.9 0.0049 E15 cortex GACTCAGCTC (3) 4.9 0.0049 Hypothalamus GACTCAGTCA 1.8 0.0018 E12.5 retina CTAACTGAGA 5.6 0.0056 E12.5 retina GACTCACTCA (3) 1.9 0.0019 E14.5 retina GACTCAGTCA 7.3 0.0073 E14.5 retina CTAACTGAGA 1.8 0.0018 E16.5 retina CTAACTGAGA 5.4 0.0054 E16.5 retina GACTCACTCA (3) 1.8 0.0018 E16.5 retina GACTCAGCTC (3) 1.8 0.0018 E16.5 retina GACTCAGTCA 1.8 0.0018 P0.5 retina CTAACTGAGA 3.9 0.0039 P0.5 retina GACTCACTCA (3) 2 0.002 P2.5 retina GACTCACTCA (3) 1.8 0.0018 P2.5 retina GACTCAGCTC (3) 1.8 0.0018 P2.5 retina GGCTGGGGGA (3) 1.8 0.0018 P2.5 retina TCTTTGGCAG (2) 1.8 0.0018 P4.5 retina CTAACTGAGA 2 0.002 P6.5 retina CTAACTGAGA 8.3 0.0083 P6.5 retina TCTTTGGCAG (2) 3.3 0.0033 P6.5 retina GACTCACTCA (3) 1.7 0.0017 P10.5 crx- retina CTAACTGAGA 9.3 0.0093 P10.5 crx- retina GACTCAGCTC (3) 5.6 0.0056 P10.5 crx- retina TCTTTGGCAG (2) 3.7 0.0037 P10.5 crx+ retina GACTCAGCTC (3) 3.8 0.0038 P10.5 crx+ retina CTAACTGAGA 1.9 0.0019 P10.5 crx+ retina GTGCTGGAGT (6) 1.9 0.0019 Adult retinal GACTCACTCA (3) 3.7 0.0037 Adult retinal GACTCAGCTC (3) 3.7 0.0037 Adult retinal CTAACTGAGA 1.9 0.0019 Adult retinal TCTTTGGCAG (2) 1.9 0.0019 ONL CTAACTGAGA 1.9 0.0019 ONL GACTCAGCTC (3) 1.9 0.0019 ONL GGCTGGGGGA (3) 1.9 0.0019 ONL GTGCTGGAGT (6) 1.9 0.0019 ONL TCTTTGGCAG (2) 1.9 0.0019