Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116942	D2Bwg1072e	DNA segment, Chr 2, Brigham & Women's Genetics 1072 expressed	2	2 4.0 cM	52805
Mm.116942	A930010G16Rik	RIKEN cDNA A930010G16 gene	2		77795
Mm.116942	Optn	optineurin	2		71648
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	OPTN[optineurin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 51 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTATTTT (14) 13.1 0.0131 P8 Cb GC CCTTGTCCTG (4) 4.9 0.0049 P8 Cb GC AGAGTCACTG (5) 1.6 0.0016 Cb medulloblastoma TTTTTATTTT (14) 4.6 0.0046 Cb medulloblastoma CCTTGTCCTG (4) 2.3 0.0023 P8 GC+1d culture TTTTTATTTT (14) 9.1 0.0091 P8 GC+1d culture CCTTGTCCTG (4) 4.6 0.0046 P8 GC+1d culture GGACCTGGCC (7) 3.4 0.0034 P8 GC+1d culture TGGCTCTTTC (4) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTATTTT (14) 10.5 0.0105 P8 GC+SHH+1d culture CCTTGTCCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TGATGGACTG (3) 1.2 0.0012 3T3 fibroblasts CCTTGTCCTG (4) 3.5 0.0035 E15 cortex CCTTGTCCTG (4) 9.9 0.0099 P1 cortex CCTTGTCCTG (4) 4.5 0.0045 P1 cortex GGACCTGGCC (7) 4.5 0.0045 Hypothalamus TTTTTATTTT (14) 5.4 0.0054 Hypothalamus AGAGTCACTG (5) 1.8 0.0018 Hypothalamus GGACCTGGCC (7) 1.8 0.0018 E12.5 retina CCTTGTCCTG (4) 7.5 0.0075 E12.5 retina TTTTTATTTT (14) 1.9 0.0019 E14.5 retina AGAGTCACTG (5) 3.6 0.0036 E14.5 retina TTTTTATTTT (14) 1.8 0.0018 E16.5 retina TTTTTATTTT (14) 3.6 0.0036 E16.5 retina CCTTGTCCTG (4) 1.8 0.0018 E18.5 retina CCTTGTCCTG (4) 3.6 0.0036 E18.5 retina TTTTTATTTT (14) 3.6 0.0036 P0.5 retina CCTTGTCCTG (4) 2 0.002 P0.5 retina TTTTTATTTT (14) 2 0.002 P2.5 retina TTTTTATTTT (14) 5.3 0.0053 P2.5 retina CCTTGTCCTG (4) 1.8 0.0018 P4.5 retina CCTTGTCCTG (4) 4 0.004 P4.5 retina TTTTTATTTT (14) 4 0.004 P6.5 retina TTTTTATTTT (14) 5 0.005 P6.5 retina CCTTGTCCTG (4) 3.3 0.0033 P6.5 retina GGACCTGGCC (7) 1.7 0.0017 P10.5 crx- retina TTTTTATTTT (14) 3.7 0.0037 P10.5 crx- retina AGAGTCACTG (5) 1.9 0.0019 P10.5 crx- retina CCTTGTCCTG (4) 1.9 0.0019 P10.5 crx- retina GGACCTGGCC (7) 1.9 0.0019 P10.5 crx- retina TGGCTCTTTC (4) 1.9 0.0019 P10.5 crx+ retina CCTTGTCCTG (4) 5.8 0.0058 P10.5 crx+ retina TTTTTATTTT (14) 5.8 0.0058 P10.5 crx+ retina GGACCTGGCC (7) 1.9 0.0019 Adult retinal CCTTGTCCTG (4) 5.6 0.0056 Adult retinal TTTTTATTTT (14) 3.7 0.0037 Adult retinal AATCTGAGAC (4) 1.9 0.0019 ONL AATCTGAGAC (4) 3.8 0.0038 ONL TGGCTCTTTC (4) 3.8 0.0038 ONL CCTTGTCCTG (4) 1.9 0.0019 ONL TTTTTATTTT (14) 1.9 0.0019