Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.11780	AU021895	expressed sequence AU021895	13		105290
Mm.11780	Tm7sf1	transmembrane 7 superfamily member 1	13	13 6.0 cM	83924
Gene Ontology	integral to membrane
Human Homolog	TM7SF1[transmembrane 7 superfamily member 1 (upregulated in kidney)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAGCAATAA (2) 1.6 0.0016 Cb medulloblastoma TCAGCAATAA (2) 4.6 0.0046 P8 GC+1d culture TCAGCAATAA (2) 11.4 0.0114 P8 GC+1d culture GCTCCACAGG (2) 1.1 0.0011 P8 GC+1d culture GTCTGTACGT (2) 1.1 0.0011 P8 GC+1d culture TGGTACAAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture TCAGCAATAA (2) 9.4 0.0094 P8 GC+SHH+1d culture GCTCCACAGG (2) 1.2 0.0012 3T3 fibroblasts GCTCCACAGG (2) 7 0.007 3T3 fibroblasts CACACTTTAC (3) 3.5 0.0035 3T3 fibroblasts TCAGCAATAA (2) 3.5 0.0035 P1 cortex TCAGCAATAA (2) 9.1 0.0091 Hypothalamus TCAGCAATAA (2) 3.6 0.0036 Hypothalamus CACACTTTAC (3) 1.8 0.0018 E12.5 retina TCAGCAATAA (2) 11.3 0.0113 E12.5 retina GCTCCACAGG (2) 3.8 0.0038 E14.5 retina TCAGCAATAA (2) 16.4 0.0164 E14.5 retina TCCCTCCCTC (3) 3.6 0.0036 E16.5 retina TCAGCAATAA (2) 5.4 0.0054 E16.5 retina CACACTTTAC (3) 1.8 0.0018 E18.5 retina TCAGCAATAA (2) 16.4 0.0164 E18.5 retina CCTGTCATTT (2) 1.8 0.0018 P0.5 retina GCTCCACAGG (2) 11.8 0.0118 P0.5 retina TCAGCAATAA (2) 5.9 0.0059 P2.5 retina TCAGCAATAA (2) 12.3 0.0123 P2.5 retina CCTGTCATTT (2) 1.8 0.0018 P2.5 retina GCTCCACAGG (2) 1.8 0.0018 P4.5 retina TCAGCAATAA (2) 19.8 0.0198 P6.5 retina TCAGCAATAA (2) 11.7 0.0117 P6.5 retina CCTGTCATTT (2) 1.7 0.0017 P10.5 crx- retina TCAGCAATAA (2) 14.9 0.0149 P10.5 crx- retina GTCTGTACGT (2) 3.7 0.0037 P10.5 crx- retina CACACTTTAC (3) 1.9 0.0019 P10.5 crx+ retina TCAGCAATAA (2) 13.5 0.0135 P10.5 crx+ retina GCTCCACAGG (2) 1.9 0.0019 Adult retinal TGGTACAAAA (2) 3.7 0.0037 Adult retinal TCCCTCCCTC (3) 1.9 0.0019 ONL TCAGCAATAA (2) 1.9 0.0019