Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.119709	Ush1c	Usher syndrome 1C homolog (human)	7	7 23.0 cM	72088
Gene Ontology	cilium | intracellular signaling cascade | parallel actin filament bundle formation | protein binding | protein binding
Human Homolog	USH1C[Usher syndrome 1C (autosomal recessive, severe)] | USH1C[Usher syndrome 1C (autosomal recessive, severe)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GATGTGGCTG 101.1 0.1011 Cb medulloblastoma GATGTGGCTG 32.4 0.0324 P8 GC+1d culture GATGTGGCTG 67.4 0.0674 P8 GC+SHH+1d culture GATGTGGCTG 74.9 0.0749 3T3 fibroblasts GATGTGGCTG 161.2 0.1612 E15 cortex GATGTGGCTG 108.9 0.1089 P1 cortex GATGTGGCTG 50 0.05 Hypothalamus CACTCTGCAA GATGTGGCTG 67 0.067 E12.5 retina GATGTGGCTG 167.1 0.1671 E14.5 retina GATGTGGCTG 120.3 0.1203 E16.5 retina GATGTGGCTG 134 0.134 E18.5 retina GATGTGGCTG 147.3 0.1473 P0.5 retina CACTCTGCAA GATGTGGCTG 80.5 0.0805 P2.5 retina GATGTGGCTG 66.9 0.0669 P4.5 retina GATGTGGCTG 35.7 0.0357 P6.5 retina CACTCTGCAA GATGTGGCTG 40 0.04 P10.5 crx- retina CACTCTGCAA GATGTGGCTG 50.2 0.0502 P10.5 crx+ retina CACTCTGCAA GATGTGGCTG 67.3 0.0673 Adult retinal GATGTGGCTG 14.8 0.0148 ONL GATGTGGCTG 11.5 0.0115