Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.119936	Atrn	attractin	2	2 73.9 cM	11990
Gene Ontology	development | inflammatory response | integral to membrane | membrane | receptor activity | regulation of body size | structural molecule activity | sugar binding
Human Homolog	ATRN[attractin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCTACAA (2) 4.9 0.0049 P8 Cb GC AACCACCAGG (6) 1.6 0.0016 P8 Cb GC GCTCCCACCT (3) 1.6 0.0016 P8 Cb GC GTTTTAGCGT 1.6 0.0016 P8 Cb GC TACTACTGCA (3) 1.6 0.0016 Cb medulloblastoma GCTCCCACCT (3) 11.6 0.0116 Cb medulloblastoma GCTCACCCCT (6) 2.3 0.0023 P8 GC+1d culture GCTCCCACCT (3) 6.8 0.0068 P8 GC+1d culture GCTCACCCCT (6) 4.6 0.0046 P8 GC+1d culture GTGGCTACAA (2) 3.4 0.0034 P8 GC+1d culture GTTTTAGCGT 1.1 0.0011 P8 GC+SHH+1d culture GCTCACCCCT (6) 4.7 0.0047 P8 GC+SHH+1d culture GCTCCCACCT (3) 3.5 0.0035 P8 GC+SHH+1d culture GTGGCTACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture GTTTTAGCGT 1.2 0.0012 3T3 fibroblasts AACCACCAGG (6) 10.5 0.0105 3T3 fibroblasts GCTCACCCCT (6) 7 0.007 3T3 fibroblasts GCTCCCACCT (3) 3.5 0.0035 E15 cortex AACCACCAGG (6) 9.9 0.0099 E15 cortex GTGGCTACAA (2) 9.9 0.0099 E15 cortex GCTCCCACCT (3) 4.9 0.0049 E12.5 retina GCAAGGAAAT 1.9 0.0019 E12.5 retina GCTCCCACCT (3) 1.9 0.0019 E12.5 retina TACTACTGCA (3) 1.9 0.0019 E14.5 retina GCTCACCCCT (6) 1.8 0.0018 E14.5 retina GTTTTAGCGT 1.8 0.0018 E16.5 retina GCTCACCCCT (6) 7.2 0.0072 E16.5 retina GCTCCCACCT (3) 1.8 0.0018 E18.5 retina GCTCACCCCT (6) 1.8 0.0018 E18.5 retina GCTCCCACCT (3) 1.8 0.0018 P0.5 retina GCTCCCACCT (3) 5.9 0.0059 P0.5 retina GCTCACCCCT (6) 2 0.002 P2.5 retina GCTCCCACCT (3) 1.8 0.0018 P2.5 retina GTTTTAGCGT 1.8 0.0018 P4.5 retina GCAAGGAAAT 2 0.002 P4.5 retina GCTCCCACCT (3) 2 0.002 P6.5 retina GCTCCCACCT (3) 1.7 0.0017 P10.5 crx- retina GCTCCCACCT (3) 13 0.013 P10.5 crx- retina GCTCACCCCT (6) 5.6 0.0056 P10.5 crx+ retina GCTCCCACCT (3) 11.5 0.0115 P10.5 crx+ retina GCTCACCCCT (6) 1.9 0.0019 P10.5 crx+ retina GTTTTAGCGT 1.9 0.0019 P10.5 crx+ retina TACTACTGCA (3) 1.9 0.0019 Adult retinal GCAAGGAAAT 3.7 0.0037 Adult retinal GCTCACCCCT (6) 1.9 0.0019 Adult retinal GCTCCCACCT (3) 1.9 0.0019 ONL GCTCACCCCT (6) 3.8 0.0038 ONL GCAAGGAAAT 1.9 0.0019 ONL GCTCCCACCT (3) 1.9 0.0019 ONL GTGGCTACAA (2) 1.9 0.0019