Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.121265	Psma1	proteasome (prosome, macropain) subunit, alpha type 1	7	7 53.0 cM	26440
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | membrane | peptidase activity | proteasome core complex (sensu Eukarya) | transport | transporter activity | ubiquitin-dependent protein catabolism
Human Homolog	PSMA1[proteasome (prosome, macropain) subunit, alpha type, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 42 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCTGCGTGC 9.8 0.0098 P8 Cb GC TTGACAACCA 1.6 0.0016 P8 Cb GC TTTATTAAAA (2) 1.6 0.0016 Cb medulloblastoma GTCTGCGTGC 2.3 0.0023 Cb medulloblastoma TTGAAAACCA 2.3 0.0023 P8 GC+1d culture GTCTGCGTGC 5.7 0.0057 P8 GC+1d culture TGTGTGGTTG 4.6 0.0046 P8 GC+1d culture TTTATTAAAA (2) 4.6 0.0046 P8 GC+1d culture CAGAGCAGAC 1.1 0.0011 P8 GC+SHH+1d culture GTCTGCGTGC 7 0.007 P8 GC+SHH+1d culture TTTATTAAAA (2) 2.3 0.0023 3T3 fibroblasts GTCTGCGTGC 24.5 0.0245 E15 cortex GTCTGCGTGC 19.8 0.0198 P1 cortex GTCTGCGTGC 9.1 0.0091 Hypothalamus TTTATTAAAA (2) 3.6 0.0036 Hypothalamus GTCTGCGTGC 1.8 0.0018 E12.5 retina GTCTGCGTGC 3.8 0.0038 E12.5 retina CAGAGCAGAC 1.9 0.0019 E12.5 retina TTGAAAACCA 1.9 0.0019 E14.5 retina TTTATTAAAA (2) 7.3 0.0073 E16.5 retina GTCTGCGTGC 3.6 0.0036 E16.5 retina TTTATTAAAA (2) 1.8 0.0018 E18.5 retina GTCTGCGTGC 3.6 0.0036 E18.5 retina TTGAAAACCA 1.8 0.0018 E18.5 retina TTGACAACCA 1.8 0.0018 P0.5 retina GTCTGCGTGC 9.8 0.0098 P0.5 retina TTTATTAAAA (2) 2 0.002 P2.5 retina GTCTGCGTGC 1.8 0.0018 P4.5 retina CAGAGCAGAC 2 0.002 P4.5 retina GTCTGCGTGC 2 0.002 P4.5 retina TTTATTAAAA (2) 2 0.002 P6.5 retina TTTATTAAAA (2) 8.3 0.0083 P6.5 retina CAGAGCAGAC 1.7 0.0017 P6.5 retina GTCTGCGTGC 1.7 0.0017 P6.5 retina TTGACAACCA 1.7 0.0017 P10.5 crx- retina GTCTGCGTGC 1.9 0.0019 P10.5 crx- retina TTTATTAAAA (2) 1.9 0.0019 P10.5 crx+ retina TTTATTAAAA (2) 7.7 0.0077 P10.5 crx+ retina GTCTGCGTGC 5.8 0.0058 Adult retinal GTCTGCGTGC 5.6 0.0056 ONL GTCTGCGTGC 1.9 0.0019 ONL TTTATTAAAA (2) 1.9 0.0019