Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.121485
Sfxn5
sideroflexin 5
6
94282
Mm.121485
D930014O13Rik
RIKEN cDNA D930014O13 gene
6
320512
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 47 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCACCCTGCC (
5
)
3.3
0.0033
P8 Cb GC
TCTTTTTAAA (
6
)
3.3
0.0033
P8 Cb GC
TGTAAATCTG
(
4
)
3.3
0.0033
P8 Cb GC
AATTTAAAAC
(
11
)
1.6
0.0016
Cb medulloblastoma
AATTTAAAAC
(
11
)
16.2
0.0162
Cb medulloblastoma
GCACCCTGCC (
5
)
2.3
0.0023
P8 GC+1d culture
GCACCCTGCC (
5
)
3.4
0.0034
P8 GC+1d culture
TGTAAATCTG
(
4
)
3.4
0.0034
P8 GC+1d culture
AATTTAAAAC
(
11
)
1.1
0.0011
P8 GC+1d culture
TCTTTTTAAA (
6
)
1.1
0.0011
P8 GC+SHH+1d culture
GCACCCTGCC (
5
)
5.9
0.0059
P8 GC+SHH+1d culture
TCTTTTTAAA (
6
)
5.9
0.0059
P8 GC+SHH+1d culture
TGTAAATCTG
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
AATTTAAAGC
(
7
)
1.2
0.0012
3T3 fibroblasts
GCACCCTGCC (
5
)
7
0.007
E15 cortex
TGTAAATCTG
(
4
)
4.9
0.0049
P1 cortex
GCACCCTGCC (
5
)
13.6
0.0136
P1 cortex
GGCAGCACTG (
3
)
4.5
0.0045
Hypothalamus
GCACCCTGCC (
5
)
1.8
0.0018
Hypothalamus
TGTAAATCTG
(
4
)
1.8
0.0018
E12.5 retina
GCACCCTGCC (
5
)
1.9
0.0019
E14.5 retina
GCACCCTGCC (
5
)
1.8
0.0018
E14.5 retina
TGTAAATCTG
(
4
)
1.8
0.0018
E16.5 retina
GCACCCTGCC (
5
)
1.8
0.0018
E16.5 retina
TCTTTTTAAA (
6
)
1.8
0.0018
E16.5 retina
TGTAAATCTG
(
4
)
1.8
0.0018
E18.5 retina
GCACCCTGCC (
5
)
9.1
0.0091
E18.5 retina
TGCACCACTG (
8
)
5.5
0.0055
P0.5 retina
GCACCCTGCC (
5
)
7.9
0.0079
P0.5 retina
AATTTAAAGC
(
7
)
2
0.002
P0.5 retina
TGTAAATCTG
(
4
)
2
0.002
P2.5 retina
GCACCCTGCC (
5
)
7
0.007
P2.5 retina
GGCAGCACTG (
3
)
1.8
0.0018
P2.5 retina
TGTAAATCTG
(
4
)
1.8
0.0018
P4.5 retina
GCACCCTGCC (
5
)
2
0.002
P6.5 retina
GCACCCTGCC (
5
)
3.3
0.0033
P6.5 retina
AATTTAAAAC
(
11
)
1.7
0.0017
P10.5 crx- retina
GCACCCTGCC (
5
)
5.6
0.0056
P10.5 crx- retina
AATTTAAAAC
(
11
)
1.9
0.0019
P10.5 crx- retina
TGTAAATCTG
(
4
)
1.9
0.0019
P10.5 crx+ retina
AATTTAAAAC
(
11
)
5.8
0.0058
P10.5 crx+ retina
GCACCCTGCC (
5
)
3.8
0.0038
P10.5 crx+ retina
TGCACCACTG (
8
)
1.9
0.0019
P10.5 crx+ retina
TGTAAATCTG
(
4
)
1.9
0.0019
Adult retinal
GCACCCTGCC (
5
)
11.1
0.0111
Adult retinal
AATTTAAAAC
(
11
)
1.9
0.0019
ONL
AATTTAAAGC
(
7
)
1.9
0.0019
