Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.121508
Nlgn3
neuroligin 3
X
245537
Mm.121508
2900075N08Rik
RIKEN cDNA 2900075N08 gene
X
72991
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGACCCTGTC (
35
)
6.5
0.0065
P8 Cb GC
GGGGTGCACA (
3
)
3.3
0.0033
P8 Cb GC
GAGTTTGTCC
(
4
)
1.6
0.0016
Cb medulloblastoma
AGACCCTGTC (
35
)
20.8
0.0208
Cb medulloblastoma
GGGGTGCACA (
3
)
9.2
0.0092
Cb medulloblastoma
GAGAGACCCT (
8
)
4.6
0.0046
Cb medulloblastoma
GGTTTCCGTT
(
2
)
4.6
0.0046
Cb medulloblastoma
AGAATAGGAC (
6
)
2.3
0.0023
Cb medulloblastoma
CCCGGTCCTA
(
2
)
2.3
0.0023
Cb medulloblastoma
TGCAGATGCG
(
2
)
2.3
0.0023
P8 GC+1d culture
GGGGTGCACA (
3
)
5.7
0.0057
P8 GC+1d culture
AGACCCTGTC (
35
)
4.6
0.0046
P8 GC+1d culture
TGCAGATGCG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGGTGCACA (
3
)
4.7
0.0047
P8 GC+SHH+1d culture
AGAATAGGAC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
AGACCCTGTC (
35
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCAGATGCG
(
2
)
1.2
0.0012
E15 cortex
AGACCCTGTC (
35
)
14.8
0.0148
E15 cortex
GGGGTGCACA (
3
)
9.9
0.0099
P1 cortex
GGTTTCCGTT
(
2
)
9.1
0.0091
P1 cortex
AGACCCTGTC (
35
)
4.5
0.0045
P1 cortex
GGGGTGCACA (
3
)
4.5
0.0045
P1 cortex
TGCAGATGCG
(
2
)
4.5
0.0045
Hypothalamus
AGACCCTGTC (
35
)
1.8
0.0018
Hypothalamus
GGGGTGCACA (
3
)
1.8
0.0018
E12.5 retina
AGACCCTGTC (
35
)
5.6
0.0056
E12.5 retina
AGAATAGGAC (
6
)
1.9
0.0019
E12.5 retina
GAGAGACCCT (
8
)
1.9
0.0019
E14.5 retina
AGACCCTGTC (
35
)
5.5
0.0055
E14.5 retina
AGAATAGGAC (
6
)
1.8
0.0018
E14.5 retina
GAGAGACCCT (
8
)
1.8
0.0018
E14.5 retina
GAGTTTGTCC
(
4
)
1.8
0.0018
E14.5 retina
GGGGTGCACA (
3
)
1.8
0.0018
E14.5 retina
GGTTTCCGTT
(
2
)
1.8
0.0018
E16.5 retina
AGAATAGGAC (
6
)
3.6
0.0036
E16.5 retina
AGACCCTGTC (
35
)
3.6
0.0036
E16.5 retina
GGTTTCCGTT
(
2
)
3.6
0.0036
E16.5 retina
GGGGTGCACA (
3
)
1.8
0.0018
E18.5 retina
AGACCCTGTC (
35
)
10.9
0.0109
E18.5 retina
TGCAGATGCG
(
2
)
1.8
0.0018
P0.5 retina
AGACCCTGTC (
35
)
2
0.002
P2.5 retina
AGACCCTGTC (
35
)
12.3
0.0123
P4.5 retina
AGACCCTGTC (
35
)
7.9
0.0079
P4.5 retina
GAGAGACCCT (
8
)
2
0.002
P6.5 retina
AGACCCTGTC (
35
)
6.7
0.0067
P6.5 retina
GGGGTGCACA (
3
)
3.3
0.0033
P6.5 retina
GAGTTTGTCC
(
4
)
1.7
0.0017
P10.5 crx- retina
TGCAGATGCG
(
2
)
3.7
0.0037
P10.5 crx- retina
AGACCCTGTC (
35
)
1.9
0.0019
P10.5 crx- retina
CCCGGTCCTA
(
2
)
1.9
0.0019
P10.5 crx- retina
GAGTTTGTCC
(
4
)
1.9
0.0019
P10.5 crx- retina
GGGGTGCACA (
3
)
1.9
0.0019
P10.5 crx- retina
GGTTTCCGTT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AGACCCTGTC (
35
)
11.5
0.0115
P10.5 crx+ retina
CCCGGTCCTA
(
2
)
3.8
0.0038
P10.5 crx+ retina
AGAATAGGAC (
6
)
1.9
0.0019
P10.5 crx+ retina
GGGGTGCACA (
3
)
1.9
0.0019
Adult retinal
AGACCCTGTC (
35
)
13
0.013
Adult retinal
AGAATAGGAC (
6
)
3.7
0.0037
Adult retinal
GGGGTGCACA (
3
)
1.9
0.0019
ONL
AGACCCTGTC (
35
)
17.2
0.0172
ONL
GAGAGACCCT (
8
)
1.9
0.0019
ONL
GGGGTGCACA (
3
)
1.9
0.0019
ONL
GGTTTCCGTT
(
2
)
1.9
0.0019
