Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1222	Gap43	growth associated protein 43	16	16 29.5 cM	14432
Gene Ontology	axon | calmodulin binding | membrane | neurogenesis | regulation of cell growth | regulation of growth
Human Homolog	GAP43[growth associated protein 43]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGTAATCA 22.8 0.0228 P8 Cb GC ATTTATTACT 1.6 0.0016 P8 Cb GC CCTGAACTTT (4) 1.6 0.0016 Cb medulloblastoma AGAGTAATCA 23.1 0.0231 Cb medulloblastoma ATTTATTACT 4.6 0.0046 P8 GC+1d culture AGAGTAATCA 85.6 0.0856 P8 GC+1d culture CCTGAACTTT (4) 25.1 0.0251 P8 GC+1d culture ATTTATTAAT 2.3 0.0023 P8 GC+1d culture CTGTGCTGTA 2.3 0.0023 P8 GC+SHH+1d culture AGAGTAATCA 110.1 0.1101 P8 GC+SHH+1d culture CCTGAACTTT (4) 9.4 0.0094 P8 GC+SHH+1d culture ATTTATTACT 2.3 0.0023 3T3 fibroblasts CCTGGACTTT 3.5 0.0035 E15 cortex CCTGAACTTT (4) 14.8 0.0148 E15 cortex AGAGTAATCA 4.9 0.0049 P1 cortex AGAGTAATCA 95.5 0.0955 P1 cortex CCTGAACTTT (4) 13.6 0.0136 P1 cortex ATTTATTACT 9.1 0.0091 Hypothalamus AGAGTAATCA 85.1 0.0851 Hypothalamus ATTTATTACT 7.2 0.0072 Hypothalamus CTGTGCTGTA 7.2 0.0072 Hypothalamus CCTGAACTTT (4) 5.4 0.0054 E12.5 retina AGAGTAATCA 28.2 0.0282 E12.5 retina CCTGAACTTT (4) 1.9 0.0019 E14.5 retina AGAGTAATCA 76.5 0.0765 E14.5 retina ATTTATTAAT 1.8 0.0018 E14.5 retina ATTTATTACT 1.8 0.0018 E16.5 retina AGAGTAATCA 48.9 0.0489 E16.5 retina CCTGAACTTT (4) 7.2 0.0072 E16.5 retina ATTTATTAAT 5.4 0.0054 E16.5 retina CTGTGCTGTA 5.4 0.0054 E16.5 retina ATTTATTACT 1.8 0.0018 E18.5 retina AGAGTAATCA 103.7 0.1037 E18.5 retina CCTGAACTTT (4) 1.8 0.0018 P0.5 retina AGAGTAATCA 31.4 0.0314 P0.5 retina CCTGAACTTT (4) 5.9 0.0059 P0.5 retina ATTTATTACT 3.9 0.0039 P0.5 retina ATTTATTAAT 2 0.002 P0.5 retina CCTGGACTTT 2 0.002 P2.5 retina AGAGTAATCA 19.4 0.0194 P2.5 retina ATTTATTACT 3.5 0.0035 P2.5 retina CCTGAACTTT (4) 1.8 0.0018 P4.5 retina AGAGTAATCA 27.7 0.0277 P4.5 retina ATTTATTACT 2 0.002 P4.5 retina CCTGAACTTT (4) 2 0.002 P6.5 retina AGAGTAATCA 35 0.035 P6.5 retina ATTTATTACT 1.7 0.0017 P10.5 crx- retina CCTGAACTTT (4) 3.7 0.0037 P10.5 crx- retina ATTTATTACT 1.9 0.0019 P10.5 crx- retina CCTGGACTTT 1.9 0.0019 P10.5 crx+ retina AGAGTAATCA 9.6 0.0096 P10.5 crx+ retina ATTTATTACT 5.8 0.0058 P10.5 crx+ retina CTGTGCTGTA 1.9 0.0019 Adult retinal ATTTATTACT 1.9 0.0019 ONL ATTTATTACT 1.9 0.0019