Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.123110	Spnb2	spectrin beta 2	11	11 13.0 cM	20742
Gene Ontology	actin binding | calmodulin binding | common-partner SMAD protein phosphorylation | cytoskeleton | membrane | nucleus | plasma membrane | protein binding | SMAD protein nuclear translocation
Human Homolog	SPTBN1[spectrin, beta, non-erythrocytic 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 50 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGCTTTTTT (4) 3.3 0.0033 P8 Cb GC TAGTTGATTT 1.6 0.0016 P8 Cb GC TGGCTTTTAT (8) 1.6 0.0016 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TAGTTGATTT 6.9 0.0069 Cb medulloblastoma TGGCTTTTCT (5) 4.6 0.0046 P8 GC+1d culture TGGCTTTTCT (5) 12.6 0.0126 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TAGTTGATTT 1.1 0.0011 P8 GC+1d culture TGGCTTTTAT (8) 1.1 0.0011 P8 GC+SHH+1d culture TGGCTTTTCT (5) 14.1 0.0141 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TGGCTTTTAT (8) 4.7 0.0047 P8 GC+SHH+1d culture TAGTTGATTT 3.5 0.0035 P8 GC+SHH+1d culture TCCATTAAAG 1.2 0.0012 3T3 fibroblasts CTCTGGATGG 38.6 0.0386 3T3 fibroblasts TGGCTTTTCT (5) 31.5 0.0315 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex CTCTGGATGG 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex TGGCTTTTCT (5) 4.9 0.0049 E15 cortex TGGCTTTTTT (4) 4.9 0.0049 P1 cortex CTCTGGATGG 4.5 0.0045 P1 cortex GGGGGGGGAA (12) 4.5 0.0045 P1 cortex TGGCTTTTCT (5) 4.5 0.0045 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina TCCATTAAAG 1.9 0.0019 E16.5 retina TGGCTTTTCT (5) 3.6 0.0036 E18.5 retina TGGCTTTTTT (4) 3.6 0.0036 E18.5 retina TGGCTTTTAT (8) 1.8 0.0018 P0.5 retina TGGCTTTTCT (5) 3.9 0.0039 P0.5 retina GGGGGGGGAA (12) 2 0.002 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina GGGGGGGGAA (12) 1.8 0.0018 P2.5 retina TAGTTGATTT 1.8 0.0018 P2.5 retina TGGCTTTTCT (5) 1.8 0.0018 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TGGCTTTTCT (5) 5.9 0.0059 P4.5 retina TGGCTTTTTT (4) 2 0.002 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TCCATTAAAG 1.7 0.0017 P6.5 retina TGGCTTTTTT (4) 1.7 0.0017 P10.5 crx- retina TGGCTTTTCT (5) 1.9 0.0019 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TGGCTTTTCT (5) 7.7 0.0077 P10.5 crx+ retina TAGTTGATTT 1.9 0.0019 Adult retinal TGGCTTTTCT (5) 7.4 0.0074 Adult retinal GGGGGGGGAA (12) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 ONL GGGGGGGGGG (112) 1.9 0.0019