Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.124328	D130027J01Rik	RIKEN cDNA D130027J01 gene	2		320543
Mm.124328	Sp3	trans-acting transcription factor 3	2		20687
Gene Ontology	B-cell differentiation | DNA binding | erythrocyte differentiation | granulocyte differentiation | monocyte differentiation | natural killer cell differentiation | nucleic acid binding | nucleus | regulation of transcription, DNA-dependent | T-cell differentiation | thymocyte differentiation | transcription factor activity | transcription factor complex | transcriptional activator activity | transcriptional repressor activity | zinc ion binding
Human Homolog	SP3[Sp3 transcription factor]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TACCTACAAC (2) 4.9 0.0049 P8 Cb GC TAGGAAAAGT (4) 3.3 0.0033 P8 Cb GC ATCATTTTGG (7) 1.6 0.0016 P8 Cb GC CTCTGAATAC (3) 1.6 0.0016 P8 Cb GC GGGGGGAGGG (17) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTCTGAATAC (3) 2.3 0.0023 Cb medulloblastoma TACCTACAAC (2) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CTCTGAATAC (3) 5.7 0.0057 P8 GC+1d culture TACCTACAAC (2) 4.6 0.0046 P8 GC+1d culture TAGGAAAAGT (4) 2.3 0.0023 P8 GC+1d culture TTTAAGATTT (4) 2.3 0.0023 P8 GC+1d culture TGTTACTGTA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CTCTGAATAC (3) 5.9 0.0059 P8 GC+SHH+1d culture TACCTACAAC (2) 2.3 0.0023 P8 GC+SHH+1d culture TAGGAAAAGT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAGATTT (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CTCTGAATAC (3) 4.5 0.0045 P1 cortex TGTTACTGTA (2) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TAGGAAAAGT (4) 1.8 0.0018 Hypothalamus TTTAAGAATT (5) 1.8 0.0018 Hypothalamus TTTAAGATTT (4) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TACCTACAAC (2) 5.6 0.0056 E12.5 retina TAGGAAAAGT (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TACCTACAAC (2) 3.6 0.0036 E14.5 retina TAGGAAAAGT (4) 1.8 0.0018 E14.5 retina TGTTACTGTA (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TACCTACAAC (2) 5.4 0.0054 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CTCTGAATAC (3) 1.8 0.0018 E18.5 retina GGGGGGAGGG (17) 1.8 0.0018 E18.5 retina TACCTACAAC (2) 1.8 0.0018 E18.5 retina TAGGAAAAGT (4) 1.8 0.0018 E18.5 retina TTTAAGAATT (5) 1.8 0.0018 E18.5 retina TTTAAGATTT (4) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TAGGAAAAGT (4) 3.9 0.0039 P0.5 retina TGTAACCATT (7) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GGGGGGAGGG (17) 1.8 0.0018 P2.5 retina TACCTACAAC (2) 1.8 0.0018 P2.5 retina TAGGAAAAGT (4) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CTCTGAATAC (3) 4 0.004 P4.5 retina GGGGGGAGGG (17) 2 0.002 P4.5 retina TACCTACAAC (2) 2 0.002 P4.5 retina TAGGAAAAGT (4) 2 0.002 P4.5 retina TTTAAGATTT (4) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CTCTGAATAC (3) 1.7 0.0017 P6.5 retina TAGGAAAAGT (4) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TTTAAGAATT (5) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CTCTGAATAC (3) 5.8 0.0058 P10.5 crx+ retina TAGGAAAAGT (4) 3.8 0.0038 P10.5 crx+ retina GGGGGGAGGG (17) 1.9 0.0019 P10.5 crx+ retina TACCTACAAC (2) 1.9 0.0019 P10.5 crx+ retina TTTAAGAATT (5) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CTCTGAATAC (3) 3.7 0.0037 Adult retinal TGTAACCATT (7) 3.7 0.0037 Adult retinal ATCATTTTGG (7) 1.9 0.0019 Adult retinal TGTTACTGTA (2) 1.9 0.0019 Adult retinal TTTAAGAATT (5) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TTTAAGAATT (5) 21.1 0.0211 ONL ATCATTTTGG (7) 1.9 0.0019 ONL GGGGGGAGGG (17) 1.9 0.0019 ONL TACCTACAAC (2) 1.9 0.0019 ONL TGTTACTGTA (2) 1.9 0.0019