Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12468	Gbas	glioblastoma amplified sequence	5	4 23.1 cM	14467
Gene Ontology	biological_process unknown | extracellular space | mitochondrion | molecular_function unknown
Human Homolog	GBAS[glioblastoma amplified sequence]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTCA (5) 3.3 0.0033 P8 Cb GC ACTTCATTTG (2) 1.6 0.0016 P8 Cb GC CGAATGATTT 1.6 0.0016 P8 Cb GC GTGGCTCGTG (2) 1.6 0.0016 P8 Cb GC TGATTTTGAA (3) 1.6 0.0016 Cb medulloblastoma AATAAACTCA (5) 16.2 0.0162 Cb medulloblastoma CGAATGATTT 11.6 0.0116 Cb medulloblastoma GTGGCTCGTG (2) 6.9 0.0069 Cb medulloblastoma TGAAAGCCCC (3) 4.6 0.0046 Cb medulloblastoma TGATTTTGAA (3) 2.3 0.0023 P8 GC+1d culture AATAAACTCA (5) 11.4 0.0114 P8 GC+1d culture TGATTTTGAA (3) 6.8 0.0068 P8 GC+1d culture GCTGGCTAGG 3.4 0.0034 P8 GC+1d culture TGAAAGCCCC (3) 2.3 0.0023 P8 GC+1d culture ATTACAGTCA 1.1 0.0011 P8 GC+1d culture CTTCTCTCCA (3) 1.1 0.0011 P8 GC+1d culture GTGGCTCGTG (2) 1.1 0.0011 P8 GC+SHH+1d culture AATAAACTCA (5) 8.2 0.0082 P8 GC+SHH+1d culture TGATTTTGAA (3) 8.2 0.0082 P8 GC+SHH+1d culture CGAATGATTT 7 0.007 P8 GC+SHH+1d culture TGAAAGCCCC (3) 2.3 0.0023 P8 GC+SHH+1d culture ACTTCATTTG (2) 1.2 0.0012 P8 GC+SHH+1d culture ATTTCATCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture GCTGGCTAGG 1.2 0.0012 3T3 fibroblasts ACTTCATTTG (2) 3.5 0.0035 3T3 fibroblasts GTGGCTCGTG (2) 3.5 0.0035 E15 cortex GCTGGCTAGG 9.9 0.0099 E15 cortex AATAAACTCA (5) 4.9 0.0049 E15 cortex ATTACAGCCA (5) 4.9 0.0049 E15 cortex GTGGCTCGTG (2) 4.9 0.0049 P1 cortex ACTTCATTTG (2) 4.5 0.0045 P1 cortex ATTACAGCCA (5) 4.5 0.0045 P1 cortex CTTCTCTCCA (3) 4.5 0.0045 Hypothalamus AATAAACTCA (5) 3.6 0.0036 Hypothalamus CGAATGATTT 3.6 0.0036 Hypothalamus TGAAAGCCCC (3) 3.6 0.0036 Hypothalamus TGATTTTGAA (3) 3.6 0.0036 Hypothalamus ATTACAGCCA (5) 1.8 0.0018 Hypothalamus GCTGGCTAGG 1.8 0.0018 E12.5 retina AATAAACTCA (5) 11.3 0.0113 E12.5 retina GCTGGCTAGG 9.4 0.0094 E12.5 retina TGAAAGCCCC (3) 9.4 0.0094 E12.5 retina CGAATGATTT 1.9 0.0019 E12.5 retina CTTCTCTCCA (3) 1.9 0.0019 E14.5 retina AATAAACTCA (5) 12.8 0.0128 E14.5 retina TGATTTTGAA (3) 9.1 0.0091 E14.5 retina TGAAAGCCCC (3) 7.3 0.0073 E14.5 retina CGAATGATTT 5.5 0.0055 E16.5 retina AATAAACTCA (5) 16.3 0.0163 E16.5 retina TGAAAGCCCC (3) 5.4 0.0054 E16.5 retina GCTGGCTAGG 3.6 0.0036 E16.5 retina GTGGCTCGTG (2) 3.6 0.0036 E16.5 retina ACTTCATTTG (2) 1.8 0.0018 E16.5 retina TGATTTTGAA (3) 1.8 0.0018 E18.5 retina AATAAACTCA (5) 21.8 0.0218 E18.5 retina CGAATGATTT 9.1 0.0091 E18.5 retina GCTGGCTAGG 7.3 0.0073 E18.5 retina TGATTTTGAA (3) 7.3 0.0073 E18.5 retina TGAAAGCCCC (3) 3.6 0.0036 E18.5 retina ACTTCATTTG (2) 1.8 0.0018 P0.5 retina AATAAACTCA (5) 5.9 0.0059 P0.5 retina CGAATGATTT 3.9 0.0039 P0.5 retina TGAAAGCCCC (3) 2 0.002 P2.5 retina CGAATGATTT 8.8 0.0088 P2.5 retina TGAAAGCCCC (3) 8.8 0.0088 P2.5 retina AATAAACTCA (5) 5.3 0.0053 P2.5 retina GCTGGCTAGG 1.8 0.0018 P2.5 retina TGATTTTGAA (3) 1.8 0.0018 P4.5 retina AATAAACTCA (5) 17.8 0.0178 P4.5 retina TGAAAGCCCC (3) 5.9 0.0059 P4.5 retina CGAATGATTT 4 0.004 P4.5 retina ACTTCATTTG (2) 2 0.002 P4.5 retina GCTGGCTAGG 2 0.002 P4.5 retina GTGGCTCGTG (2) 2 0.002 P4.5 retina TGATTTTGAA (3) 2 0.002 P6.5 retina TGAAAGCCCC (3) 11.7 0.0117 P6.5 retina GCTGGCTAGG 8.3 0.0083 P6.5 retina AATAAACTCA (5) 5 0.005 P6.5 retina ATTACAGTCA 3.3 0.0033 P6.5 retina TGATTTTGAA (3) 3.3 0.0033 P6.5 retina ATTTCATCTC (2) 1.7 0.0017 P6.5 retina CGAATGATTT 1.7 0.0017 P10.5 crx- retina AATAAACTCA (5) 16.7 0.0167 P10.5 crx- retina TGAAAGCCCC (3) 5.6 0.0056 P10.5 crx- retina ACTTCATTTG (2) 3.7 0.0037 P10.5 crx- retina CGAATGATTT 1.9 0.0019 P10.5 crx- retina TGATTTTGAA (3) 1.9 0.0019 P10.5 crx+ retina TGAAAGCCCC (3) 7.7 0.0077 P10.5 crx+ retina TGATTTTGAA (3) 7.7 0.0077 P10.5 crx+ retina AATAAACTCA (5) 5.8 0.0058 P10.5 crx+ retina CGAATGATTT 5.8 0.0058 P10.5 crx+ retina ATTACAGTCA 3.8 0.0038 P10.5 crx+ retina ACTTCATTTG (2) 1.9 0.0019 P10.5 crx+ retina GCTGGCTAGG 1.9 0.0019 P10.5 crx+ retina GTGGCTCGTG (2) 1.9 0.0019 Adult retinal GCTGGCTAGG 5.6 0.0056 Adult retinal TGATTTTGAA (3) 5.6 0.0056 ONL AATAAACTCA (5) 15.3 0.0153 ONL TGATTTTGAA (3) 7.7 0.0077 ONL ATTACAGCCA (5) 3.8 0.0038 ONL GCTGGCTAGG 3.8 0.0038 ONL CGAATGATTT 1.9 0.0019