Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1249	Lamc1	laminin, gamma 1	1	1 81.1 cM	226519
Gene Ontology	basal lamina | basement membrane | cell adhesion | extracellular matrix | extracellular matrix structural constituent | extracellular space | protein binding | structural molecule activity
Human Homolog	LAMC1[laminin, gamma 1 (formerly LAMB2)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAATGAAA (3) 9.8 0.0098 P8 Cb GC GGCGGGGGCG 4.9 0.0049 P8 Cb GC ATGATGGCAG (2) 1.6 0.0016 P8 Cb GC GAATTTTCCT (7) 1.6 0.0016 Cb medulloblastoma ACCAATGAAA (3) 27.7 0.0277 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 P8 GC+1d culture ACCAATGAAA (3) 60.5 0.0605 P8 GC+1d culture GGCGGGGGCG 2.3 0.0023 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TTTGTATCAC (2) 1.1 0.0011 P8 GC+SHH+1d culture ACCAATGAAA (3) 44.5 0.0445 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture ATGATGGCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture GAATTTTCCT (7) 1.2 0.0012 P8 GC+SHH+1d culture GGCGGGGGCG 1.2 0.0012 P8 GC+SHH+1d culture TTGTTTGGCT 1.2 0.0012 3T3 fibroblasts GGCGGGGGCG 10.5 0.0105 3T3 fibroblasts ATGATGGCAG (2) 3.5 0.0035 3T3 fibroblasts CGTGGCATTT 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 P1 cortex ACCAATGAAA (3) 9.1 0.0091 Hypothalamus ACCAATGAAA (3) 52.5 0.0525 Hypothalamus TTTGTATCAC (2) 3.6 0.0036 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina ACCAATGAAA (3) 13.1 0.0131 E12.5 retina GAATTTTCCT (7) 1.9 0.0019 E14.5 retina ACCAATGAAA (3) 10.9 0.0109 E14.5 retina TTGTTTGGCT 1.8 0.0018 E16.5 retina ACCAATGAAA (3) 29 0.029 E16.5 retina GAATTTTCCT (7) 1.8 0.0018 E16.5 retina TGATGACTGA (2) 1.8 0.0018 E18.5 retina ACCAATGAAA (3) 16.4 0.0164 P0.5 retina ACCAATGAAA (3) 3.9 0.0039 P0.5 retina ATGATGGCAG (2) 2 0.002 P2.5 retina ACCAATGAAA (3) 10.6 0.0106 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina CGTGGCATTT 3.5 0.0035 P2.5 retina GAATTTTCCT (7) 3.5 0.0035 P4.5 retina ACCAATGAAA (3) 17.8 0.0178 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P6.5 retina ACCAATGAAA (3) 18.3 0.0183 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P10.5 crx- retina ACCAATGAAA (3) 20.4 0.0204 P10.5 crx+ retina ACCAATGAAA (3) 13.5 0.0135 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina GAATTTTCCT (7) 1.9 0.0019 P10.5 crx+ retina TGATGACTGA (2) 1.9 0.0019 P10.5 crx+ retina TTGTTTGGCT 1.9 0.0019 Adult retinal ACCAATGAAA (3) 7.4 0.0074 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal TGATGACTGA (2) 1.9 0.0019 ONL ACCAATGAAA (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019