Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.125770	Nespas	neuroendocrine secretory protein antisense	2	2 104.0 cM	56802
Mm.125770	A930027G11Rik	RIKEN cDNA A930027G11 gene	2		78290
Mm.125770	AF085738	cDNA sequence AF085738	2		192158
Mm.125770	Gnas	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	2	2 104.0 cM	14683
Gene Ontology	energy reserve metabolism | G-protein coupled receptor protein signaling pathway | G-protein coupled receptor protein signaling pathway | G-protein signaling, adenylate cyclase activating pathway | G-protein signaling, adenylate cyclase activating pathway | GTP binding | GTPase activity | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane fraction | response to drug | signal transducer activity | signal transduction
Human Homolog	GNAS[GNAS complex locus]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCAACACCG (4) 58.7 0.0587 P8 Cb GC CATCTCCGCC (4) 6.5 0.0065 P8 Cb GC CCCTATGGTG (4) 1.6 0.0016 P8 Cb GC GGCTGCCTCG (4) 1.6 0.0016 P8 Cb GC GTCATTCGGG (4) 1.6 0.0016 P8 Cb GC TTCGATGTGG (4) 1.6 0.0016 P8 Cb GC TTGTAGCTGC (4) 1.6 0.0016 Cb medulloblastoma ATCAACACCG (4) 57.8 0.0578 Cb medulloblastoma TTTCAGCAAA (5) 11.6 0.0116 Cb medulloblastoma GTCATTCGGG (4) 4.6 0.0046 Cb medulloblastoma AGTTTAAAAA (4) 2.3 0.0023 Cb medulloblastoma CCCTATGGTG (4) 2.3 0.0023 Cb medulloblastoma TTCCCAGGTG (4) 2.3 0.0023 Cb medulloblastoma TTGTAGCTGC (4) 2.3 0.0023 P8 GC+1d culture ATCAACACCG (4) 75.3 0.0753 P8 GC+1d culture TTTCAGCAAA (5) 3.4 0.0034 P8 GC+1d culture GCGGCCACAA (4) 2.3 0.0023 P8 GC+1d culture CAGGATCCTC (4) 1.1 0.0011 P8 GC+1d culture CATCTCCGCC (4) 1.1 0.0011 P8 GC+1d culture CCCTATGGTG (4) 1.1 0.0011 P8 GC+1d culture GGCTGCCTCG (4) 1.1 0.0011 P8 GC+1d culture GTCATTCGGG (4) 1.1 0.0011 P8 GC+1d culture TTCCCAGGTG (4) 1.1 0.0011 P8 GC+1d culture TTCGATGTGG (4) 1.1 0.0011 P8 GC+SHH+1d culture ATCAACACCG (4) 63.2 0.0632 P8 GC+SHH+1d culture CGCTGGATGA (5) 4.7 0.0047 P8 GC+SHH+1d culture CATCTCCGCC (4) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGCCTCG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGGAAGTTGA (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTCAGCAAA (5) 1.2 0.0012 3T3 fibroblasts ATCAACACCG (4) 31.5 0.0315 3T3 fibroblasts CATCTCCGCC (4) 3.5 0.0035 3T3 fibroblasts CGCTGGATGA (5) 3.5 0.0035 E15 cortex ATCAACACCG (4) 99 0.099 E15 cortex CATCTCCGCC (4) 4.9 0.0049 E15 cortex CGCTGGATGA (5) 4.9 0.0049 P1 cortex ATCAACACCG (4) 36.4 0.0364 P1 cortex GCGGCCACAA (4) 4.5 0.0045 P1 cortex TTCCCAGGTG (4) 4.5 0.0045 Hypothalamus TTTCAGCAAA (5) 54.3 0.0543 Hypothalamus ATCAACACCG (4) 41.7 0.0417 Hypothalamus CAGAGAGTTT (4) 9.1 0.0091 Hypothalamus CCCTATGGTG (4) 3.6 0.0036 Hypothalamus CGCTGGATGA (5) 3.6 0.0036 Hypothalamus GCGGCCACAA (4) 3.6 0.0036 Hypothalamus CAGGATCCTC (4) 1.8 0.0018 Hypothalamus GTCATTCGGG (4) 1.8 0.0018 Hypothalamus TGGAAGTTGA (4) 1.8 0.0018 E12.5 retina ATCAACACCG (4) 24.4 0.0244 E12.5 retina CATCTCCGCC (4) 1.9 0.0019 E12.5 retina CCCTATGGTG (4) 1.9 0.0019 E12.5 retina GCGGCCACAA (4) 1.9 0.0019 E12.5 retina GGCTGCCTCG (4) 1.9 0.0019 E14.5 retina ATCAACACCG (4) 23.7 0.0237 E14.5 retina TTGTAGCTGC (4) 5.5 0.0055 E14.5 retina CCCTATGGTG (4) 3.6 0.0036 E14.5 retina CGCTGGATGA (5) 3.6 0.0036 E14.5 retina CAGGATCCTC (4) 1.8 0.0018 E14.5 retina GGCTGCCTCG (4) 1.8 0.0018 E16.5 retina ATCAACACCG (4) 32.6 0.0326 E16.5 retina CATCTCCGCC (4) 5.4 0.0054 E16.5 retina CCCTATGGTG (4) 3.6 0.0036 E16.5 retina CGCTGGATGA (5) 3.6 0.0036 E16.5 retina GCGGCCACAA (4) 3.6 0.0036 E16.5 retina GGCTGCCTCG (4) 3.6 0.0036 E16.5 retina CAGGATCCTC (4) 1.8 0.0018 E16.5 retina TGGAAGTTGA (4) 1.8 0.0018 E16.5 retina TTCGATGTGG (4) 1.8 0.0018 E16.5 retina TTGTAGCTGC (4) 1.8 0.0018 E16.5 retina TTTCAGCAAA (5) 1.8 0.0018 E18.5 retina ATCAACACCG (4) 3.6 0.0036 E18.5 retina TTTCAGCAAA (5) 1.8 0.0018 P0.5 retina ATCAACACCG (4) 56.9 0.0569 P0.5 retina CATCTCCGCC (4) 3.9 0.0039 P0.5 retina CGCTGGATGA (5) 2 0.002 P0.5 retina TTGCAGAGGG (4) 2 0.002 P2.5 retina ATCAACACCG (4) 22.9 0.0229 P2.5 retina AGTTTAAAAA (4) 3.5 0.0035 P2.5 retina CGCTGGATGA (5) 3.5 0.0035 P2.5 retina TTTCAGCAAA (5) 3.5 0.0035 P2.5 retina GCGGCCACAA (4) 1.8 0.0018 P2.5 retina TTCCCAGGTG (4) 1.8 0.0018 P4.5 retina ATCAACACCG (4) 15.9 0.0159 P4.5 retina GCGGCCACAA (4) 2 0.002 P4.5 retina GGCTGCCTCG (4) 2 0.002 P4.5 retina TTGCAGAGGG (4) 2 0.002 P4.5 retina TTTCAGCAAA (5) 2 0.002 P6.5 retina ATCAACACCG (4) 20 0.02 P6.5 retina TTTCAGCAAA (5) 3.3 0.0033 P6.5 retina TTCCCAGGTG (4) 1.7 0.0017 P10.5 crx- retina ATCAACACCG (4) 63.2 0.0632 P10.5 crx- retina CGCTGGATGA (5) 3.7 0.0037 P10.5 crx- retina CAGAGAGTTT (4) 1.9 0.0019 P10.5 crx- retina CCCTATGGTG (4) 1.9 0.0019 P10.5 crx- retina GGCTGCCTCG (4) 1.9 0.0019 P10.5 crx+ retina ATCAACACCG (4) 28.8 0.0288 P10.5 crx+ retina CCCTATGGTG (4) 3.8 0.0038 P10.5 crx+ retina CGCTGGATGA (5) 3.8 0.0038 P10.5 crx+ retina GGCTGCCTCG (4) 1.9 0.0019 P10.5 crx+ retina TTTCAGCAAA (5) 1.9 0.0019 Adult retinal ATCAACACCG (4) 44.4 0.0444 Adult retinal TTTCAGCAAA (5) 7.4 0.0074 Adult retinal CATCTCCGCC (4) 1.9 0.0019 Adult retinal CGCTGGATGA (5) 1.9 0.0019 Adult retinal TTCGATGTGG (4) 1.9 0.0019 Adult retinal TTGCAGAGGG (4) 1.9 0.0019 ONL ATCAACACCG (4) 7.7 0.0077 ONL TTTCAGCAAA (5) 3.8 0.0038 ONL TTCCCAGGTG (4) 1.9 0.0019