Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.12677
Atp5c1
ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
2
11949
Mm.12677
D13Mgi7
DNA Segment, Chr 13, Mouse Genome Informatics 7
13
97882
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACAACGCCA
(
2
)
27.7
0.0277
Cb medulloblastoma
GACAACGCCA
(
2
)
23.1
0.0231
Cb medulloblastoma
GCAACTCTGA
(
3
)
2.3
0.0023
P8 GC+1d culture
GACAACGCCA
(
2
)
19.4
0.0194
P8 GC+1d culture
GTCTCAGCAG
(
2
)
3.4
0.0034
P8 GC+SHH+1d culture
GACAACGCCA
(
2
)
14.1
0.0141
P8 GC+SHH+1d culture
GTCTCAGCAG
(
2
)
1.2
0.0012
3T3 fibroblasts
GACAACGCCA
(
2
)
56.1
0.0561
E15 cortex
GACAACGCCA
(
2
)
54.4
0.0544
E15 cortex
AGCATCTATG
(
2
)
4.9
0.0049
P1 cortex
GACAACGCCA
(
2
)
13.6
0.0136
Hypothalamus
GACAACGCCA
(
2
)
10.9
0.0109
Hypothalamus
GCAACTCTGA
(
3
)
3.6
0.0036
Hypothalamus
GTCTCAGCAG
(
2
)
1.8
0.0018
E12.5 retina
GACAACGCCA
(
2
)
9.4
0.0094
E14.5 retina
GACAACGCCA
(
2
)
16.4
0.0164
E14.5 retina
GTCTCAGCAG
(
2
)
12.8
0.0128
E14.5 retina
GTTCTCGGGC
(
3
)
1.8
0.0018
E16.5 retina
GACAACGCCA
(
2
)
7.2
0.0072
E16.5 retina
AGCATCTATG
(
2
)
5.4
0.0054
E16.5 retina
GTCTCAGCAG
(
2
)
3.6
0.0036
E18.5 retina
GACAACGCCA
(
2
)
3.6
0.0036
E18.5 retina
GTCTCAGCAG
(
2
)
1.8
0.0018
P0.5 retina
GACAACGCCA
(
2
)
29.4
0.0294
P0.5 retina
GTCTCAGCAG
(
2
)
3.9
0.0039
P0.5 retina
GCAACTCTGA
(
3
)
2
0.002
P0.5 retina
GTTCTCGGGC
(
3
)
2
0.002
P2.5 retina
GACAACGCCA
(
2
)
12.3
0.0123
P2.5 retina
GTCTCAGCAG
(
2
)
3.5
0.0035
P4.5 retina
GACAACGCCA
(
2
)
5.9
0.0059
P6.5 retina
GACAACGCCA
(
2
)
28.3
0.0283
P6.5 retina
GCAACTCTGA
(
3
)
1.7
0.0017
P10.5 crx- retina
GACAACGCCA
(
2
)
65
0.065
P10.5 crx- retina
GCAACTCTGA
(
3
)
7.4
0.0074
P10.5 crx- retina
GTCTCAGCAG
(
2
)
1.9
0.0019
P10.5 crx+ retina
GACAACGCCA
(
2
)
38.4
0.0384
P10.5 crx+ retina
GTCTCAGCAG
(
2
)
1.9
0.0019
Adult retinal
GACAACGCCA
(
2
)
25.9
0.0259
Adult retinal
GTTCTCGGGC
(
3
)
3.7
0.0037
Adult retinal
GCAACTCTGA
(
3
)
1.9
0.0019
ONL
GACAACGCCA
(
2
)
17.2
0.0172
