| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 8.2 | 0.0082 |
| Cb medulloblastoma | AAAGCTCTAT (2) GAGAAACCCA (3)
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3) GCCATTGATT (2)
| 20.5 | 0.0205 |
| P8 GC+SHH+1d culture | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 16.4 | 0.0164 |
| 3T3 fibroblasts | CAAGTGCACT (3) GAGAAACCCA (3)
| 10.5 | 0.0105 |
| E15 cortex | CAAGTGCACT (3) GAGAAACCCA (3)
| 9.8 | 0.0098 |
| P1 cortex | GAGAAACCCA (3)
| 4.5 | 0.0045 |
| Hypothalamus | AAAGCTCTAT (2) AAAGCTTTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 9 | 0.009 |
| E12.5 retina | AAAGCTCTAT (2) AAAGCTTTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 13.2 | 0.0132 |
| E14.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3) GCCATTGATT (2)
| 21.8 | 0.0218 |
| E16.5 retina | CAAGTGCACT (3) GAGAAACCCA (3) GCCATTGATT (2)
| 16.3 | 0.0163 |
| E18.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3) GCCATTGATT (2)
| 20 | 0.02 |
| P0.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 17.6 | 0.0176 |
| P2.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 26.4 | 0.0264 |
| P4.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3) GCCATTGATT (2)
| 33.7 | 0.0337 |
| P6.5 retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 16.7 | 0.0167 |
| P10.5 crx- retina | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 29.7 | 0.0297 |
| P10.5 crx+ retina | AAAGCTCTAT (2) CAAGTGCACT (3)
| 13.4 | 0.0134 |
| Adult retinal | AAAGCTCTAT (2) AAAGCTTTAT (2) CAAGTGCACT (3)
| 7.5 | 0.0075 |
| ONL | AAAGCTCTAT (2) CAAGTGCACT (3) GAGAAACCCA (3)
| 7.6 | 0.0076 |