Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.127058	Stard4	StAR-related lipid transfer (START) domain containing 4	18	18 12.0 cM	170459
Gene Ontology	cholesterol binding | cholesterol transporter activity | lipid binding | lipid transport | mitochondrion | steroid biosynthesis | transport
Human Homolog	STARD4[START domain containing 4, sterol regulated]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGCTGTCT (4) 3.3 0.0033 P8 Cb GC TGCACAGTGC (4) 1.6 0.0016 Cb medulloblastoma AACACAATGG (2) 2.3 0.0023 Cb medulloblastoma TGCACAGTGC (4) 2.3 0.0023 P8 GC+1d culture TGAGCTGTCT (4) 4.6 0.0046 P8 GC+1d culture GGACTTGTAA (3) 3.4 0.0034 P8 GC+1d culture TTCCTGCCTG (3) 2.3 0.0023 P8 GC+1d culture TAACTTTAAA (2) 1.1 0.0011 P8 GC+1d culture TAACTTTTAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GGACTTGTAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TAAAATGTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TAACTTTTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGAGCTGTCT (4) 1.2 0.0012 P8 GC+SHH+1d culture TTCCTGCCTG (3) 1.2 0.0012 3T3 fibroblasts TGCACAGTGC (4) 378.5 0.3785 3T3 fibroblasts GGACTTGTAA (3) 7 0.007 3T3 fibroblasts TGAGCTGTCT (4) 3.5 0.0035 3T3 fibroblasts TTCCTGCCCT 3.5 0.0035 3T3 fibroblasts TTCCTGCCTG (3) 3.5 0.0035 P1 cortex TGAGCTGTCT (4) 4.5 0.0045 P1 cortex TGCACAGTGC (4) 4.5 0.0045 Hypothalamus TAACTTTAAA (2) 3.6 0.0036 Hypothalamus TGAGCTGTCT (4) 1.8 0.0018 E12.5 retina GGACTTGTAA (3) 5.6 0.0056 E12.5 retina TGAGCTGTCT (4) 1.9 0.0019 E12.5 retina TTCCTGCCTG (3) 1.9 0.0019 E14.5 retina TTCCTGCCTG (3) 3.6 0.0036 E14.5 retina TAAAATGTAA (2) 1.8 0.0018 E16.5 retina TTCCTGCCTG (3) 3.6 0.0036 E18.5 retina AACACAATGG (2) 1.8 0.0018 E18.5 retina TGAGCTGTCT (4) 1.8 0.0018 P0.5 retina GGACTTGTAA (3) 3.9 0.0039 P0.5 retina TAAAATGTAA (2) 3.9 0.0039 P0.5 retina TTCCTGCCTG (3) 3.9 0.0039 P0.5 retina TAACTTTAAA (2) 2 0.002 P2.5 retina GGACTTGTAA (3) 5.3 0.0053 P2.5 retina TAAAATGTAA (2) 1.8 0.0018 P2.5 retina TAACTTTAAA (2) 1.8 0.0018 P2.5 retina TAACTTTTAA (2) 1.8 0.0018 P2.5 retina TTCCTGCCCT 1.8 0.0018 P4.5 retina GGACTTGTAA (3) 4 0.004 P4.5 retina TTCCTGCCTG (3) 2 0.002 P6.5 retina TTCCTGCCTG (3) 3.3 0.0033 P10.5 crx- retina TGCACAGTGC (4) 3.7 0.0037 P10.5 crx- retina AACACAATGG (2) 1.9 0.0019 P10.5 crx- retina GGACTTGTAA (3) 1.9 0.0019 P10.5 crx+ retina TAAAATGTAA (2) 1.9 0.0019 P10.5 crx+ retina TGAGCTGTCT (4) 1.9 0.0019 Adult retinal TGAGCTGTCT (4) 1.9 0.0019 Adult retinal TTCCTGCCTG (3) 1.9 0.0019 ONL TAAAATGTAA (2) 3.8 0.0038 ONL TTCCTGCCCT 3.8 0.0038 ONL TGAGCTGTCT (4) 1.9 0.0019