Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.127405	1700129L13Rik	RIKEN cDNA 1700129L13 gene	10		67933
Human Homolog	HCFC2[host cell factor C2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACAGTGACT (2) 3.3 0.0033 P8 Cb GC TTAAGTCACC (2) 1.6 0.0016 Cb medulloblastoma GGCCCACATC (4) 2.3 0.0023 Cb medulloblastoma GTTCTAATAC 2.3 0.0023 Cb medulloblastoma TACAGTGACT (2) 2.3 0.0023 Cb medulloblastoma TTAAGTCACC (2) 2.3 0.0023 P8 GC+1d culture GGCCCACATC (4) 2.3 0.0023 P8 GC+1d culture GATTTGTCTG (2) 1.1 0.0011 P8 GC+1d culture GTTCTAATAC 1.1 0.0011 P8 GC+SHH+1d culture TACAGTGACT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCCCACATC (4) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGTCACC (2) 1.2 0.0012 3T3 fibroblasts TACAGTGACT (2) 10.5 0.0105 3T3 fibroblasts TTAAGTCACC (2) 3.5 0.0035 E15 cortex GGCCCACATC (4) 4.9 0.0049 P1 cortex GGCCCACATC (4) 4.5 0.0045 P1 cortex TACAGTGACT (2) 4.5 0.0045 P1 cortex TTAAGTCACC (2) 4.5 0.0045 Hypothalamus GGCCCACATC (4) 10.9 0.0109 Hypothalamus TTAAGTCACC (2) 5.4 0.0054 Hypothalamus TACAGTGACT (2) 3.6 0.0036 E12.5 retina GGCCCACATC (4) 1.9 0.0019 E14.5 retina TTAAGTCACC (2) 1.8 0.0018 E16.5 retina GGCCCACATC (4) 3.6 0.0036 E18.5 retina GGCCCACATC (4) 1.8 0.0018 E18.5 retina GTTCTAATAC 1.8 0.0018 E18.5 retina TTAAGTCACC (2) 1.8 0.0018 P0.5 retina GATTTGTCTG (2) 2 0.002 P2.5 retina TTAAGTCACC (2) 1.8 0.0018 P4.5 retina GATTTGTCTG (2) 2 0.002 P4.5 retina GTTCTAATAC 2 0.002 P4.5 retina TTAAGTCACC (2) 2 0.002 P6.5 retina GGCCCACATC (4) 3.3 0.0033 P6.5 retina TACAGTGACT (2) 1.7 0.0017 P10.5 crx- retina GATTTGTCTG (2) 7.4 0.0074 P10.5 crx- retina GGCCCACATC (4) 1.9 0.0019 P10.5 crx+ retina GTTCTAATAC 3.8 0.0038 Adult retinal GGCCCACATC (4) 5.6 0.0056 Adult retinal GATTTGTCTG (2) 3.7 0.0037 Adult retinal TACAGTGACT (2) 1.9 0.0019 ONL GATTTGTCTG (2) 5.7 0.0057