Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12758	Fkbp4	FK506 binding protein 4	6		14228
Gene Ontology	isomerase activity | nucleus | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	FKBP4[FK506 binding protein 4, 59kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 164 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGTGGGTG (5) 8.2 0.0082 P8 Cb GC GAGAAAGGAG (6) 4.9 0.0049 P8 Cb GC TTTGAGAGGC (2) 4.9 0.0049 P8 Cb GC ACCGCCGAGG 3.3 0.0033 P8 Cb GC TTGGAGAAGG (4) 3.3 0.0033 P8 Cb GC CACTCCGACT (4) 1.6 0.0016 P8 Cb GC GCAGAAGGAG (4) 1.6 0.0016 Cb medulloblastoma TTGGAGAAGG (4) 27.7 0.0277 Cb medulloblastoma GAGAAAAGGA (9) 9.2 0.0092 Cb medulloblastoma AAAGTGGGTG (5) 6.9 0.0069 Cb medulloblastoma GGTACACCGC 6.9 0.0069 Cb medulloblastoma AAAAGGTGGC 2.3 0.0023 Cb medulloblastoma CACTCCGACT (4) 2.3 0.0023 Cb medulloblastoma GAGAAAGGAG (6) 2.3 0.0023 Cb medulloblastoma GCAGAACAGG (5) 2.3 0.0023 Cb medulloblastoma GGGCCAATAA (6) 2.3 0.0023 Cb medulloblastoma TTTTAGAGGC 2.3 0.0023 P8 GC+1d culture GGTACACCGC 14.8 0.0148 P8 GC+1d culture GAGAAAGGAG (6) 8 0.008 P8 GC+1d culture TTTGAGAGGC (2) 5.7 0.0057 P8 GC+1d culture TTGGAGAAGG (4) 4.6 0.0046 P8 GC+1d culture CGGGAAAGCA (5) 3.4 0.0034 P8 GC+1d culture AAAGTGGGTG (5) 2.3 0.0023 P8 GC+1d culture GAGAAAAGGA (9) 1.1 0.0011 P8 GC+1d culture TGAAGAGAGG (7) 1.1 0.0011 P8 GC+SHH+1d culture GGTACACCGC 11.7 0.0117 P8 GC+SHH+1d culture GAGAAAGGAG (6) 7 0.007 P8 GC+SHH+1d culture AAAGTGGGTG (5) 3.5 0.0035 P8 GC+SHH+1d culture GAGAAAAGGA (9) 3.5 0.0035 P8 GC+SHH+1d culture TTTGAGAGGC (2) 3.5 0.0035 P8 GC+SHH+1d culture CCCCTAGCAC (5) 1.2 0.0012 P8 GC+SHH+1d culture CGGGAAAGCA (5) 1.2 0.0012 P8 GC+SHH+1d culture GAGAACGGAG (3) 1.2 0.0012 P8 GC+SHH+1d culture GCAGAACAGG (5) 1.2 0.0012 P8 GC+SHH+1d culture GGGCACTACT (8) 1.2 0.0012 P8 GC+SHH+1d culture GGGCCAATAA (6) 1.2 0.0012 P8 GC+SHH+1d culture TGAAAATGGA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTGGAGAAGG (4) 1.2 0.0012 P8 GC+SHH+1d culture TTTTAGAGGC 1.2 0.0012 3T3 fibroblasts GGTACACCGC 28 0.028 3T3 fibroblasts TTTGAGAGGC (2) 10.5 0.0105 3T3 fibroblasts CCCCTAGCAC (5) 7 0.007 3T3 fibroblasts GCAGAACAGG (5) 3.5 0.0035 3T3 fibroblasts GGGCACTACT (8) 3.5 0.0035 E15 cortex GAGAAAAGGA (9) 14.8 0.0148 E15 cortex GGTACACCGC 14.8 0.0148 E15 cortex GAGAAAGGAG (6) 9.9 0.0099 E15 cortex GCAGAAGGAG (4) 9.9 0.0099 E15 cortex ACAAGTGGGG (5) 4.9 0.0049 E15 cortex CGGGAAAGCA (5) 4.9 0.0049 P1 cortex AAAGTGGGTG (5) 9.1 0.0091 P1 cortex TTGGAGAAGG (4) 9.1 0.0091 P1 cortex CGGGAAAGCA (5) 4.5 0.0045 Hypothalamus TTGGAGAAGG (4) 7.2 0.0072 Hypothalamus GAGAAAAGGA (9) 5.4 0.0054 Hypothalamus AAAAGGTGGC 3.6 0.0036 Hypothalamus GAGAAAGGAG (6) 3.6 0.0036 Hypothalamus TTTGAGAGGC (2) 3.6 0.0036 Hypothalamus AAAGTGGGTG (5) 1.8 0.0018 Hypothalamus ACAAGTGGGG (5) 1.8 0.0018 Hypothalamus CGGGAAAGCA (5) 1.8 0.0018 Hypothalamus GCAGAACAGG (5) 1.8 0.0018 Hypothalamus GCAGAAGGAG (4) 1.8 0.0018 E12.5 retina TTTGAGAGGC (2) 15 0.015 E12.5 retina AAAGTGGGTG (5) 7.5 0.0075 E12.5 retina GGTACACCGC 5.6 0.0056 E12.5 retina GAGAAAGGAG (6) 3.8 0.0038 E12.5 retina TGAAGAGAGG (7) 3.8 0.0038 E12.5 retina CCCCTAGCAC (5) 1.9 0.0019 E12.5 retina GAGAAAAGGA (9) 1.9 0.0019 E12.5 retina GAGAACGGAG (3) 1.9 0.0019 E12.5 retina GCAGAACAGG (5) 1.9 0.0019 E12.5 retina GCAGAAGGAG (4) 1.9 0.0019 E12.5 retina TTTGAGAGGT (6) 1.9 0.0019 E14.5 retina TTTGAGAGGC (2) 10.9 0.0109 E14.5 retina TTTTAGAGGC 7.3 0.0073 E14.5 retina AAAGTGGGTG (5) 3.6 0.0036 E14.5 retina CACTCCGACT (4) 3.6 0.0036 E14.5 retina GGTACACCGC 3.6 0.0036 E14.5 retina ACCGCCGAGG 1.8 0.0018 E14.5 retina CGGGAAAGCA (5) 1.8 0.0018 E14.5 retina GAGACAGGAG 1.8 0.0018 E16.5 retina GAGAAAGGAG (6) 9.1 0.0091 E16.5 retina GGTACACCGC 7.2 0.0072 E16.5 retina TTTTAGAGGC 5.4 0.0054 E16.5 retina GCAGAACAGG (5) 3.6 0.0036 E16.5 retina TTTGAGAGGC (2) 3.6 0.0036 E16.5 retina CACTCCGACT (4) 1.8 0.0018 E16.5 retina CGGGAAAGCA (5) 1.8 0.0018 E16.5 retina GCAGAAGGAG (4) 1.8 0.0018 E16.5 retina TGAAGAGAGG (7) 1.8 0.0018 E16.5 retina TTGGAGAAGG (4) 1.8 0.0018 E18.5 retina GGTACACCGC 10.9 0.0109 E18.5 retina GAAGGCAGGT (4) 3.6 0.0036 E18.5 retina GAGAAAGGAG (6) 3.6 0.0036 E18.5 retina AAAGTGGGTG (5) 1.8 0.0018 E18.5 retina GCAGAACAGG (5) 1.8 0.0018 E18.5 retina GCAGAAGGAG (4) 1.8 0.0018 E18.5 retina TTGGAGAAGG (4) 1.8 0.0018 E18.5 retina TTTGAGAGGC (2) 1.8 0.0018 P0.5 retina GGTACACCGC 11.8 0.0118 P0.5 retina TTTGAGAGGC (2) 11.8 0.0118 P0.5 retina AAAGTGGGTG (5) 5.9 0.0059 P0.5 retina GAGAAAGGAG (6) 2 0.002 P0.5 retina TGAAGAGAGG (7) 2 0.002 P0.5 retina TTGGAGAAGG (4) 2 0.002 P2.5 retina AAAGTGGGTG (5) 8.8 0.0088 P2.5 retina GGTACACCGC 3.5 0.0035 P2.5 retina TTTGAGAGGC (2) 3.5 0.0035 P2.5 retina ACAAGTGGGG (5) 1.8 0.0018 P2.5 retina CGGGAAAGCA (5) 1.8 0.0018 P2.5 retina GAAGGCAGGT (4) 1.8 0.0018 P2.5 retina GAGAAAAGGA (9) 1.8 0.0018 P2.5 retina TTGGAGAAGG (4) 1.8 0.0018 P2.5 retina TTTGAGAGGT (6) 1.8 0.0018 P2.5 retina TTTTAGAGGC 1.8 0.0018 P4.5 retina GAGAAAGGAG (6) 15.9 0.0159 P4.5 retina TTGGAGAAGG (4) 5.9 0.0059 P4.5 retina AAAGTGGGTG (5) 4 0.004 P4.5 retina CGGGAAAGCA (5) 2 0.002 P4.5 retina GCAGAACAGG (5) 2 0.002 P4.5 retina GGTACACCGC 2 0.002 P4.5 retina TGAAAATGGA (3) 2 0.002 P6.5 retina AAAGTGGGTG (5) 18.3 0.0183 P6.5 retina GAGAAAGGAG (6) 18.3 0.0183 P6.5 retina TTTGAGAGGC (2) 5 0.005 P6.5 retina CGGGAAAGCA (5) 3.3 0.0033 P6.5 retina GCAGAACAGG (5) 3.3 0.0033 P6.5 retina GGTACACCGC 3.3 0.0033 P6.5 retina TTGGAGAAGG (4) 1.7 0.0017 P10.5 crx- retina AAAGTGGGTG (5) 9.3 0.0093 P10.5 crx- retina GAGAAAGGAG (6) 9.3 0.0093 P10.5 crx- retina GGTACACCGC 5.6 0.0056 P10.5 crx- retina TTTGAGAGGC (2) 5.6 0.0056 P10.5 crx- retina CCCCTAGCAC (5) 1.9 0.0019 P10.5 crx- retina GAGAAAAGGA (9) 1.9 0.0019 P10.5 crx- retina TTGGAGAAGG (4) 1.9 0.0019 P10.5 crx- retina TTTTAGAGGC 1.9 0.0019 P10.5 crx+ retina AAAGTGGGTG (5) 15.4 0.0154 P10.5 crx+ retina GCAGAAGGAG (4) 1.9 0.0019 P10.5 crx+ retina TGAAAATGGA (3) 1.9 0.0019 P10.5 crx+ retina TTGGAGAAGG (4) 1.9 0.0019 P10.5 crx+ retina TTTGAGAGGC (2) 1.9 0.0019 P10.5 crx+ retina TTTGAGAGGT (6) 1.9 0.0019 Adult retinal AAAGTGGGTG (5) 9.3 0.0093 Adult retinal GGTACACCGC 7.4 0.0074 Adult retinal GAGAAAGGAG (6) 5.6 0.0056 Adult retinal TTGGAGAAGG (4) 3.7 0.0037 Adult retinal TTTGAGAGGC (2) 3.7 0.0037 Adult retinal GAGAAAAGGA (9) 1.9 0.0019 Adult retinal GCAGAACAGG (5) 1.9 0.0019 Adult retinal GCAGAAGGAG (4) 1.9 0.0019 Adult retinal GGGCACTACT (8) 1.9 0.0019 Adult retinal TTTGAGAGGT (6) 1.9 0.0019 Adult retinal TTTTAGAGGC 1.9 0.0019 ONL CGGGAAAGCA (5) 7.7 0.0077 ONL AAAGTGGGTG (5) 5.7 0.0057 ONL GGTACACCGC 5.7 0.0057 ONL GAGACAGGAG 3.8 0.0038 ONL GCAGAACAGG (5) 3.8 0.0038 ONL TTTGAGAGGT (6) 3.8 0.0038 ONL GAGAAAGGAG (6) 1.9 0.0019 ONL GCAGAAGGAG (4) 1.9 0.0019 ONL TGAAAATGGA (3) 1.9 0.0019