Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.128165	Elys	embryonic large molecule derived from yolk sac	1	1 102.0 cM	226747
Gene Ontology	cytoplasm | nuclear matrix | regulation of transcription | transcription factor activity
Human Homolog	ELYS[ELYS transcription factor-like protein TMBS62]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GCGGCTCACA (5) 9.8 0.0098 P8 Cb GC CTCATTTCCT (4) 4.9 0.0049 P8 Cb GC CTCATTGCCT (2) 3.3 0.0033 P8 Cb GC ATCTCCTTTG (2) 1.6 0.0016 P8 Cb GC GAATAAAGTG (4) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GCGGCTCACA (5) 9.2 0.0092 Cb medulloblastoma CTCATTGCCT (2) 6.9 0.0069 Cb medulloblastoma CTCATTTCCT (4) 4.6 0.0046 Cb medulloblastoma AAGTTTCTAG (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GCGGCTCACA (5) 8 0.008 P8 GC+1d culture AAGTTTCTAG (2) 1.1 0.0011 P8 GC+1d culture ATCTCCTTTG (2) 1.1 0.0011 P8 GC+1d culture CTCATTGCCT (2) 1.1 0.0011 P8 GC+1d culture GAGTGCAGTT 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GCGGCTCACA (5) 7 0.007 P8 GC+SHH+1d culture AAAAACATCT (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGTTCATCA 2.3 0.0023 P8 GC+SHH+1d culture AAGTTTCTAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTCATTTCCT (4) 1.2 0.0012 P8 GC+SHH+1d culture GAGTGCAGTT 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GCGGCTCACA (5) 28 0.028 3T3 fibroblasts GAGTGCAGTT 10.5 0.0105 3T3 fibroblasts GAATAAAGTG (4) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GCGGCTCACA (5) 54.4 0.0544 E15 cortex CTCATTTCCT (4) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GCGGCTCACA (5) 27.3 0.0273 P1 cortex CTCATTTCCT (4) 4.5 0.0045 P1 cortex GAATAAAGTG (4) 4.5 0.0045 P1 cortex GAGTGCAGTT 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GCGGCTCACA (5) 21.7 0.0217 Hypothalamus CTCATTGCCT (2) 5.4 0.0054 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GCGGCTCACA (5) 9.4 0.0094 E12.5 retina GAGTGCAGTT 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GCGGCTCACA (5) 18.2 0.0182 E14.5 retina CTCATTGCCT (2) 1.8 0.0018 E14.5 retina CTCATTTCCT (4) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GCGGCTCACA (5) 7.2 0.0072 E16.5 retina CTCATTTCCT (4) 3.6 0.0036 E16.5 retina AAAAACATCT (5) 1.8 0.0018 E16.5 retina ATGTTCATCA 1.8 0.0018 E16.5 retina GAATAAAGTG (4) 1.8 0.0018 E16.5 retina GAGTGCAGTT 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GCGGCTCACA (5) 9.1 0.0091 E18.5 retina CTCATTTCCT (4) 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GCGGCTCACA (5) 11.8 0.0118 P0.5 retina AAGTTTCTAG (2) 3.9 0.0039 P0.5 retina CTCATTGCCT (2) 3.9 0.0039 P0.5 retina AAAAACATCT (5) 2 0.002 P0.5 retina CCCACAATTC (3) 2 0.002 P0.5 retina GAATAAAGTG (4) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GCGGCTCACA (5) 5.3 0.0053 P2.5 retina AAAAACATCT (5) 1.8 0.0018 P2.5 retina CTCATTGCCT (2) 1.8 0.0018 P2.5 retina CTCATTTCCT (4) 1.8 0.0018 P2.5 retina GAATAAAGTG (4) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GCGGCTCACA (5) 11.9 0.0119 P4.5 retina GAGTGCAGTT 4 0.004 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GCGGCTCACA (5) 15 0.015 P6.5 retina CCCACAATTC (3) 3.3 0.0033 P6.5 retina GAGTGCAGTT 3.3 0.0033 P6.5 retina AAAAACATCT (5) 1.7 0.0017 P6.5 retina CTCATTTCCT (4) 1.7 0.0017 P6.5 retina GAATAAAGTG (4) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GCGGCTCACA (5) 9.3 0.0093 P10.5 crx- retina AAAAACATCT (5) 5.6 0.0056 P10.5 crx- retina CTCATTTCCT (4) 5.6 0.0056 P10.5 crx- retina CTCATTGCCT (2) 3.7 0.0037 P10.5 crx- retina ATCTCCTTTG (2) 1.9 0.0019 P10.5 crx- retina ATGTTCATCA 1.9 0.0019 P10.5 crx- retina GAGTGCAGTT 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GCGGCTCACA (5) 19.2 0.0192 P10.5 crx+ retina AAAAACATCT (5) 7.7 0.0077 P10.5 crx+ retina ATCTCCTTTG (2) 1.9 0.0019 P10.5 crx+ retina CTCATTGCCT (2) 1.9 0.0019 P10.5 crx+ retina GAGTGCAGTT 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GCGGCTCACA (5) 14.8 0.0148 Adult retinal CTCATTGCCT (2) 3.7 0.0037 Adult retinal CTCATTTCCT (4) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GCGGCTCACA (5) 28.7 0.0287 ONL AAAAACATCT (5) 1.9 0.0019 ONL GAGTGCAGTT 1.9 0.0019