Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.128512	Rbm3	RNA binding motif protein 3	X	X 2.0 cM	19652
Gene Ontology	RNA binding
Human Homolog	RBM3[RNA binding motif (RNP1, RRM) protein 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 102 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTGCTTAGA 88.1 0.0881 P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC TGTTCTTTAA (2) 8.2 0.0082 P8 Cb GC ATAAACATTG (4) 1.6 0.0016 P8 Cb GC ATTGCTTAAA 1.6 0.0016 P8 Cb GC CACACAAAAA (7) 1.6 0.0016 P8 Cb GC GCAGAAGGCA (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma ATTGCTTAGA 30.1 0.0301 Cb medulloblastoma CACACAAATA (2) 2.3 0.0023 Cb medulloblastoma GTGTTTCCTT (6) 2.3 0.0023 Cb medulloblastoma TGTTCTTTAA (2) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture ATTGCTTAGA 24 0.024 P8 GC+1d culture ATAAACATTG (4) 2.3 0.0023 P8 GC+1d culture CACACAAAAA (7) 1.1 0.0011 P8 GC+1d culture CAGGAAAGTC 1.1 0.0011 P8 GC+1d culture GTGTTTCCTT (6) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ATTGCTTAGA 26.9 0.0269 P8 GC+SHH+1d culture ATAAACATTG (4) 4.7 0.0047 P8 GC+SHH+1d culture TGTTCTTTAA (2) 2.3 0.0023 P8 GC+SHH+1d culture CACACAAAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CACACAAAAT (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts ATTGCTTAGA 21 0.021 3T3 fibroblasts GCCAGAAAGT (6) 3.5 0.0035 3T3 fibroblasts GTGTTTCCTT (6) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex ATTGCTTAGA 14.8 0.0148 E15 cortex CACACAAAAA (7) 4.9 0.0049 E15 cortex GCCAGAAAGT (6) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex ATTGCTTAGA 27.3 0.0273 P1 cortex CACACAAAAA (7) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus ATTGCTTAGA 7.2 0.0072 Hypothalamus CACACAAAAT (4) 1.8 0.0018 Hypothalamus CAGGAAAGTC 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina ATTGCTTAGA 30 0.03 E12.5 retina ATAAACATTG (4) 3.8 0.0038 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina ATTGCTTAGA 45.5 0.0455 E14.5 retina CACACAAATA (2) 7.3 0.0073 E14.5 retina TGTTCTTTAA (2) 3.6 0.0036 E14.5 retina ATAAACATTG (4) 1.8 0.0018 E14.5 retina GTGTTTCCTT (6) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina ATTGCTTAGA 43.5 0.0435 E16.5 retina ATTGCTTAAA 3.6 0.0036 E16.5 retina CACACAAATA (2) 1.8 0.0018 E16.5 retina CAGGAAAGTC 1.8 0.0018 E16.5 retina GCAGAAGGCA (2) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina ATTGCTTAGA 12.7 0.0127 E18.5 retina ATAAACATTG (4) 1.8 0.0018 E18.5 retina GCAGAAGGCA (2) 1.8 0.0018 E18.5 retina GTGTTTCCTT (6) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina ATTGCTTAGA 62.8 0.0628 P0.5 retina ATTGCTTAAA 3.9 0.0039 P0.5 retina CACACAAATA (2) 3.9 0.0039 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina ATTGCTTAGA 45.8 0.0458 P2.5 retina CACACAAATA (2) 3.5 0.0035 P2.5 retina CACACAAAAA (7) 1.8 0.0018 P2.5 retina GCAGAAGGCA (2) 1.8 0.0018 P2.5 retina TGTTCTTTAA (2) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina ATTGCTTAGA 13.9 0.0139 P4.5 retina CACACAAATA (2) 4 0.004 P4.5 retina CACACAAAAA (7) 2 0.002 P4.5 retina GCCAGAAAGT (6) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina ATTGCTTAGA 18.3 0.0183 P6.5 retina ATAAACATTG (4) 3.3 0.0033 P6.5 retina ATTGCTTAAA 1.7 0.0017 P6.5 retina GCCAGAAAGT (6) 1.7 0.0017 P6.5 retina TGTTCTTTAA (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina ATTGCTTAGA 37.2 0.0372 P10.5 crx- retina ATTGCTTAAA 3.7 0.0037 P10.5 crx- retina TGTTCTTTAA (2) 3.7 0.0037 P10.5 crx- retina CACACAAATA (2) 1.9 0.0019 P10.5 crx- retina CAGGAAAAGT (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina ATTGCTTAGA 15.4 0.0154 P10.5 crx+ retina CACACAAAAA (7) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal ATTGCTTAGA 9.3 0.0093 Adult retinal CACACAAAAT (4) 3.7 0.0037 Adult retinal CACACAAAAA (7) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL ATTGCTTAGA 9.6 0.0096 ONL TGTTCTTTAA (2) 5.7 0.0057 ONL ATAAACATTG (4) 3.8 0.0038 ONL CACACAAATA (2) 3.8 0.0038 ONL CAGGAAAAGT (3) 3.8 0.0038 ONL ATTGCTTAAA 1.9 0.0019 ONL CACACAAAAA (7) 1.9 0.0019 ONL GTGTTTCCTT (6) 1.9 0.0019