Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.128663
4931428D14Rik
RIKEN cDNA 4931428D14 gene
11
11 A3.3
216618
Human Homolog
MGC15407[similar to RIKEN cDNA 4931428D14 gene]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ATGAGTCTGT
(
2
)
9.8
0.0098
P8 Cb GC
CCTGGTGCCT (
7
)
1.6
0.0016
Cb medulloblastoma
ATGAGTCTGT
(
2
)
4.6
0.0046
Cb medulloblastoma
CCTATAATCC (
15
)
2.3
0.0023
P8 GC+1d culture
ATGAGTCTGT
(
2
)
4.6
0.0046
P8 GC+1d culture
CACCATCATA (
2
)
1.1
0.0011
P8 GC+1d culture
CCTATAATCC (
15
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGAGTCTGT
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
AGAAAGGATA
(
3
)
1.2
0.0012
E15 cortex
CCTATAATCC (
15
)
4.9
0.0049
E15 cortex
CCTGGTGCCT (
7
)
4.9
0.0049
P1 cortex
ATGAGTCTGT
(
2
)
22.7
0.0227
P1 cortex
CACCATCATA (
2
)
4.5
0.0045
P1 cortex
CCTATAATCC (
15
)
4.5
0.0045
Hypothalamus
ATGAGTCTGT
(
2
)
34.4
0.0344
Hypothalamus
CACCATCATA (
2
)
1.8
0.0018
E14.5 retina
CACCATCATA (
2
)
3.6
0.0036
E14.5 retina
ATGAGTCTGT
(
2
)
1.8
0.0018
E14.5 retina
CCTGGTGCCT (
7
)
1.8
0.0018
E14.5 retina
GCATTTTTTT (
9
)
1.8
0.0018
E16.5 retina
ATGAGTCTGT
(
2
)
10.9
0.0109
E16.5 retina
CCTATAATCC (
15
)
3.6
0.0036
E16.5 retina
AGAAAGGATA
(
3
)
1.8
0.0018
E18.5 retina
ATGAGTCTGT
(
2
)
14.6
0.0146
E18.5 retina
CACCATCATA (
2
)
1.8
0.0018
P0.5 retina
ATGAGTCTGT
(
2
)
5.9
0.0059
P0.5 retina
CACCATCATA (
2
)
2
0.002
P0.5 retina
CTCTAAGCCA
(
2
)
2
0.002
P2.5 retina
ATGAGTCTGT
(
2
)
15.8
0.0158
P2.5 retina
CCTATAATCC (
15
)
1.8
0.0018
P4.5 retina
ATGAGTCTGT
(
2
)
17.8
0.0178
P4.5 retina
GCATTTTTTT (
9
)
2
0.002
P6.5 retina
ATGAGTCTGT
(
2
)
10
0.01
P6.5 retina
CCTATAATCC (
15
)
1.7
0.0017
P6.5 retina
GCATTTTTTT (
9
)
1.7
0.0017
P10.5 crx- retina
ATGAGTCTGT
(
2
)
7.4
0.0074
P10.5 crx- retina
CTCTAAGCCA
(
2
)
3.7
0.0037
P10.5 crx- retina
AGAAAGGATA
(
3
)
1.9
0.0019
P10.5 crx- retina
CACCATCATA (
2
)
1.9
0.0019
P10.5 crx+ retina
ATGAGTCTGT
(
2
)
23.1
0.0231
P10.5 crx+ retina
CCTGGTGCCT (
7
)
3.8
0.0038
P10.5 crx+ retina
AGAAAGGATA
(
3
)
1.9
0.0019
Adult retinal
ATGAGTCTGT
(
2
)
20.4
0.0204
Adult retinal
CCTGGTGCCT (
7
)
3.7
0.0037
ONL
ATGAGTCTGT
(
2
)
19.2
0.0192
ONL
CCTATAATCC (
15
)
3.8
0.0038
