Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12926	Pparbp	peroxisome proliferator activated receptor binding protein	11		19014
Gene Ontology	brain development | chromatin binding | development | DNA binding | DNA replication | heart development | mediator complex | nucleus | organogenesis | positive regulation of transcription from Pol II promoter | protein binding | receptor activity | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | regulation of transcription, DNA-dependent | thyroid hormone generation | transcription coactivator activity | transcription coactivator activity | transcription coactivator activity | transcription from Pol II promoter
Human Homolog	PPARBP[PPAR binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAATAAATT (2) 6.5 0.0065 P8 Cb GC TATGTGTGTG (19) 1.6 0.0016 P8 Cb GC TTTGTGTGTG (9) 1.6 0.0016 Cb medulloblastoma CAAATAAATT (2) 4.6 0.0046 Cb medulloblastoma TTTGTGTGTG (9) 2.3 0.0023 P8 GC+1d culture TATGTGTGTG (19) 5.7 0.0057 P8 GC+1d culture AAGTCAACGT (3) 1.1 0.0011 P8 GC+SHH+1d culture TATGTGTGTG (19) 8.2 0.0082 P8 GC+SHH+1d culture CAAATAAATT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCACGGGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TAAAGAAAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TTTGTGTGTG (9) 1.2 0.0012 3T3 fibroblasts GGCACGGGAA (3) 17.5 0.0175 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TATGTGTGTG (19) 3.5 0.0035 E15 cortex CAAATAAATT (2) 9.9 0.0099 E15 cortex GGCACGGGAA (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TATGTGTGTG (19) 9.1 0.0091 P1 cortex TTTGTGTGTG (9) 4.5 0.0045 Hypothalamus CAAATAAATT (2) 5.4 0.0054 Hypothalamus TAAAGAAAGT (2) 1.8 0.0018 E12.5 retina TTTGTGTGTG (9) 3.8 0.0038 E12.5 retina AAGTCAACGT (3) 1.9 0.0019 E12.5 retina TATGTGTGTG (19) 1.9 0.0019 E14.5 retina AAGTCAACGT (3) 1.8 0.0018 E16.5 retina CAAATAAATT (2) 3.6 0.0036 E18.5 retina CAAATAAATT (2) 5.5 0.0055 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TATGTGTGTG (19) 3.9 0.0039 P0.5 retina CAAATAAATT (2) 2 0.002 P2.5 retina CAAATAAATT (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TATGTGTGTG (19) 1.8 0.0018 P2.5 retina TTTGTGTGTG (9) 1.8 0.0018 P4.5 retina CAAATAAATT (2) 5.9 0.0059 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina TTTGTGTGTG (9) 2 0.002 P6.5 retina CAAATAAATT (2) 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AAGTCAACGT (3) 1.7 0.0017 P10.5 crx- retina TATGTGTGTG (19) 1.9 0.0019 P10.5 crx+ retina CAAATAAATT (2) 3.8 0.0038 P10.5 crx+ retina AAGTCAACGT (3) 1.9 0.0019 P10.5 crx+ retina GGCACGGGAA (3) 1.9 0.0019 P10.5 crx+ retina TATGTGTGTG (19) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TATGTGTGTG (19) 1.9 0.0019 Adult retinal TTTGTGTGTG (9) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TTTGTGTGTG (9) 5.7 0.0057 ONL CAAATAAATT (2) 3.8 0.0038 ONL GGCACGGGAA (3) 1.9 0.0019 ONL TAAAGAAAGT (2) 1.9 0.0019