Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.130054	C630044B11Rik	RIKEN cDNA C630044B11 gene	13		78712
Mm.130054	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	13	13 36.0 cM	18212
Gene Ontology	ATP binding | cytosol | feeding behavior | integral to membrane | kinase activity | membrane | neurogenesis | plasma membrane | protein amino acid phosphorylation | protein binding | protein kinase activity | protein-tyrosine kinase activity | receptor activity | regulation of metabolism | retinal rod cell development | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway
Human Homolog	NTRK2[neurotrophic tyrosine kinase, receptor, type 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC CCAAACTTGG (2) 1.6 0.0016 Cb medulloblastoma CTGTCTAGAG (4) 2.3 0.0023 Cb medulloblastoma TCCACCAGAT (7) 2.3 0.0023 P8 GC+1d culture CTGTCTAGAG (4) 3.4 0.0034 P8 GC+1d culture TCTGTTTGTC (3) 3.4 0.0034 P8 GC+1d culture AAAGGTTTTG (2) 1.1 0.0011 P8 GC+1d culture TCTGTCTGTC (15) 1.1 0.0011 P8 GC+SHH+1d culture AAAGGTTTTG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCAAACTTGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTGTCTAGAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTTTGTC (3) 1.2 0.0012 E15 cortex GACCTCAGCA (10) 9.9 0.0099 E15 cortex CCAAACTTGG (2) 4.9 0.0049 E15 cortex CTGTCTAGAG (4) 4.9 0.0049 E15 cortex TCCACCAGAT (7) 4.9 0.0049 P1 cortex TCTGTTTGTC (3) 13.6 0.0136 P1 cortex AAAGGTTTTG (2) 4.5 0.0045 Hypothalamus GACCTCAGCA (10) 1.8 0.0018 E14.5 retina CTGTCTAGAG (4) 1.8 0.0018 E16.5 retina TCTGTTTGTC (3) 1.8 0.0018 P0.5 retina TCTGTTTGTC (3) 3.9 0.0039 P0.5 retina CTGTCTAGAG (4) 2 0.002 P0.5 retina TCCACCAGAT (7) 2 0.002 P0.5 retina TCTGTCTGTC (15) 2 0.002 P2.5 retina TCCACCAGAT (7) 1.8 0.0018 P2.5 retina TCTGTCTGTC (15) 1.8 0.0018 P4.5 retina ATTCCGAATT (107) 2 0.002 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina TCTGTTTGTC (3) 3.3 0.0033 P6.5 retina CTGTCTAGAG (4) 1.7 0.0017 P6.5 retina TCTGTCTGTC (15) 1.7 0.0017 P10.5 crx- retina TCTGTTTGTC (3) 11.1 0.0111 P10.5 crx- retina CTGTCTAGAG (4) 1.9 0.0019 P10.5 crx+ retina TCTGTCTGTC (15) 1.9 0.0019 P10.5 crx+ retina TCTGTTTGTC (3) 1.9 0.0019 Adult retinal TCCACCAGAT (7) 5.6 0.0056 Adult retinal TCTGTTTGTC (3) 3.7 0.0037 Adult retinal AAAGGTTTTG (2) 1.9 0.0019 Adult retinal TCTGTCTGTC (15) 1.9 0.0019 ONL ATTCCGAATT (107) 3.8 0.0038