Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.131150	Dek	DEK oncogene (DNA binding)	13	13 28.0 cM	110052
Gene Ontology	cell growth and/or maintenance | DNA binding | nucleus | pathogenesis | regulation of transcription from Pol II promoter | signal transduction | specific RNA polymerase II transcription factor activity | viral life cycle
Human Homolog	DEK[DEK oncogene (DNA binding)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGCCCCT (4) 16.3 0.0163 P8 Cb GC TGTGCTCACG (3) 6.5 0.0065 P8 Cb GC GCAGAAGTGA (5) 3.3 0.0033 P8 Cb GC TAACATCACT 3.3 0.0033 P8 Cb GC TACGTGTTGG (2) 1.6 0.0016 P8 Cb GC TTAATCTTGC (2) 1.6 0.0016 Cb medulloblastoma GCAGAAGTGA (5) 9.2 0.0092 Cb medulloblastoma TTAATCTTGC (2) 6.9 0.0069 Cb medulloblastoma ACAGAAGTGA (4) 4.6 0.0046 Cb medulloblastoma GCAGTAATCG 2.3 0.0023 P8 GC+1d culture GACTGCCCCT (4) 11.4 0.0114 P8 GC+1d culture GCAGAAGTGA (5) 11.4 0.0114 P8 GC+1d culture TTAATCTTGC (2) 5.7 0.0057 P8 GC+1d culture TGTGCTCACG (3) 2.3 0.0023 P8 GC+1d culture ATTGTAAAAA (4) 1.1 0.0011 P8 GC+1d culture GATTTATATA (5) 1.1 0.0011 P8 GC+SHH+1d culture GACTGCCCCT (4) 9.4 0.0094 P8 GC+SHH+1d culture GCAGAAGTGA (5) 5.9 0.0059 P8 GC+SHH+1d culture TTAATCTTGC (2) 3.5 0.0035 P8 GC+SHH+1d culture ACAGAAGTGA (4) 2.3 0.0023 P8 GC+SHH+1d culture ATTGTAAAAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGCTCACG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTCATCACT (4) 1.2 0.0012 3T3 fibroblasts TCGGCGGCGG 35 0.035 3T3 fibroblasts GCAGAAGTGA (5) 31.5 0.0315 3T3 fibroblasts GACTGCCCCT (4) 21 0.021 3T3 fibroblasts TGTGCTCACG (3) 14 0.014 E15 cortex GCAGAAGTGA (5) 9.9 0.0099 E15 cortex GACTGCCCCT (4) 4.9 0.0049 E15 cortex TCGGCGGCGG 4.9 0.0049 P1 cortex GACTGCCCCT (4) 9.1 0.0091 P1 cortex TGTCATCACT (4) 4.5 0.0045 P1 cortex TGTGCTCACG (3) 4.5 0.0045 P1 cortex TTAATCTTGC (2) 4.5 0.0045 Hypothalamus GCAGAAGTGA (5) 7.2 0.0072 Hypothalamus GACTGCCCCT (4) 3.6 0.0036 Hypothalamus GATTTATATA (5) 1.8 0.0018 Hypothalamus TTAATCTTGC (2) 1.8 0.0018 E12.5 retina GACTGCCCCT (4) 9.4 0.0094 E12.5 retina TACGTGTTGG (2) 7.5 0.0075 E12.5 retina ACAGAAGTGA (4) 5.6 0.0056 E12.5 retina GCAGAAGTGA (5) 1.9 0.0019 E12.5 retina GCAGTAATCG 1.9 0.0019 E12.5 retina TTAATCTTGC (2) 1.9 0.0019 E14.5 retina GACTGCCCCT (4) 7.3 0.0073 E14.5 retina GCAGAAGTGA (5) 3.6 0.0036 E14.5 retina TTAATCTTGC (2) 1.8 0.0018 E16.5 retina GACTGCCCCT (4) 21.7 0.0217 E16.5 retina GCAGAAGTGA (5) 10.9 0.0109 E16.5 retina GATTTATATA (5) 3.6 0.0036 E16.5 retina TTAAAGAGCA (3) 3.6 0.0036 E16.5 retina TTAATCTTGC (2) 3.6 0.0036 E16.5 retina ACAGAAGTGA (4) 1.8 0.0018 E16.5 retina TTTCATCACT (4) 1.8 0.0018 E18.5 retina GACTGCCCCT (4) 9.1 0.0091 E18.5 retina GCAGAAGTGA (5) 5.5 0.0055 E18.5 retina ACAGAAGTGA (4) 1.8 0.0018 E18.5 retina TGTGCTCACG (3) 1.8 0.0018 E18.5 retina TTTCATCACT (4) 1.8 0.0018 P0.5 retina GACTGCCCCT (4) 23.6 0.0236 P0.5 retina TACGTGTTGG (2) 11.8 0.0118 P0.5 retina GCAGAAGTGA (5) 9.8 0.0098 P0.5 retina TGTCATCACT (4) 5.9 0.0059 P0.5 retina TGTGCTCACG (3) 5.9 0.0059 P0.5 retina TCGGCGGCGG 2 0.002 P0.5 retina TTAAAGAGCA (3) 2 0.002 P0.5 retina TTTCATCACT (4) 2 0.002 P2.5 retina GACTGCCCCT (4) 8.8 0.0088 P2.5 retina ACAGAAGTGA (4) 3.5 0.0035 P2.5 retina GATTTATATA (5) 3.5 0.0035 P2.5 retina GCAGAAGTGA (5) 3.5 0.0035 P2.5 retina TGTGCTCACG (3) 1.8 0.0018 P2.5 retina TTAAAGAGCA (3) 1.8 0.0018 P4.5 retina ACAGAAGTGA (4) 4 0.004 P4.5 retina GACTGCCCCT (4) 2 0.002 P4.5 retina GATTTATATA (5) 2 0.002 P4.5 retina TTAATCTTGC (2) 2 0.002 P6.5 retina GACTGCCCCT (4) 5 0.005 P6.5 retina GATTTATATA (5) 5 0.005 P6.5 retina GCAGAAGTGA (5) 5 0.005 P6.5 retina GCAGTAATCG 3.3 0.0033 P6.5 retina TGTCATCACT (4) 3.3 0.0033 P6.5 retina ATTGTAAAAA (4) 1.7 0.0017 P10.5 crx- retina GCAGAAGTGA (5) 18.6 0.0186 P10.5 crx- retina GACTGCCCCT (4) 5.6 0.0056 P10.5 crx- retina TTAATCTTGC (2) 5.6 0.0056 P10.5 crx- retina GATTTATATA (5) 1.9 0.0019 P10.5 crx- retina GCAGTAATCG 1.9 0.0019 P10.5 crx+ retina GACTGCCCCT (4) 9.6 0.0096 P10.5 crx+ retina GCAGAAGTGA (5) 7.7 0.0077 P10.5 crx+ retina TGTGCTCACG (3) 3.8 0.0038 P10.5 crx+ retina ATTGTAAAAA (4) 1.9 0.0019 P10.5 crx+ retina GATTTATATA (5) 1.9 0.0019 P10.5 crx+ retina TAACATCACT 1.9 0.0019 P10.5 crx+ retina TTAATCTTGC (2) 1.9 0.0019 Adult retinal GACTGCCCCT (4) 9.3 0.0093 Adult retinal GCAGAAGTGA (5) 7.4 0.0074 Adult retinal ACAGAAGTGA (4) 1.9 0.0019 Adult retinal TGTCATCACT (4) 1.9 0.0019 Adult retinal TGTGCTCACG (3) 1.9 0.0019 Adult retinal TTAAAGAGCA (3) 1.9 0.0019 ONL GCAGAAGTGA (5) 11.5 0.0115 ONL GACTGCCCCT (4) 3.8 0.0038 ONL ACAGAAGTGA (4) 1.9 0.0019 ONL GATTTATATA (5) 1.9 0.0019 ONL GCAGTAATCG 1.9 0.0019 ONL TTTCATCACT (4) 1.9 0.0019