Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.131266	Mmp19	matrix metalloproteinase 19	10	10 70.0 cM	58223
Gene Ontology	angiogenesis | collagen catabolism | extracellular matrix | extracellular space | hydrolase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP19[matrix metalloproteinase 19]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGATGGAG (7) 3.3 0.0033 P8 Cb GC CCTTTAGTCC (27) 1.6 0.0016 P8 Cb GC CTGCTTTCCC (4) 1.6 0.0016 P8 GC+1d culture CCTTTAGTCC (27) 10.3 0.0103 P8 GC+1d culture GAAGATGGAG (7) 10.3 0.0103 P8 GC+1d culture TATATGTATG (5) 2.3 0.0023 P8 GC+SHH+1d culture GAAGATGGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture CCTTTAGTCC (27) 3.5 0.0035 P8 GC+SHH+1d culture TATATGTATG (5) 2.3 0.0023 3T3 fibroblasts GAAGATGGAG (7) 21 0.021 E15 cortex CCTTTAGTCC (27) 9.9 0.0099 E15 cortex GAAGATGGAG (7) 9.9 0.0099 P1 cortex CCTTTAGTCC (27) 27.3 0.0273 P1 cortex CTGCTTTCCC (4) 4.5 0.0045 P1 cortex GAAGATGGAG (7) 4.5 0.0045 Hypothalamus CCTTTAGTCC (27) 3.6 0.0036 Hypothalamus GAAGATGGAG (7) 3.6 0.0036 Hypothalamus CTGCTTTCCC (4) 1.8 0.0018 E12.5 retina GAAGATGGAG (7) 15 0.015 E12.5 retina CCTTTAGTCC (27) 5.6 0.0056 E12.5 retina CTGCTTTCCC (4) 1.9 0.0019 E14.5 retina CCTTTAGTCC (27) 14.6 0.0146 E14.5 retina GAAGATGGAG (7) 1.8 0.0018 E16.5 retina CCTTTAGTCC (27) 5.4 0.0054 E16.5 retina CTGCTTTCCC (4) 3.6 0.0036 E16.5 retina GAAGATGGAG (7) 1.8 0.0018 E16.5 retina TATATGTATG (5) 1.8 0.0018 E18.5 retina CCTTTAGTCC (27) 5.5 0.0055 E18.5 retina GAAGATGGAG (7) 5.5 0.0055 E18.5 retina CTGCTTTCCC (4) 1.8 0.0018 P0.5 retina GAAGATGGAG (7) 17.7 0.0177 P0.5 retina CCTTTAGTCC (27) 7.9 0.0079 P2.5 retina GAAGATGGAG (7) 14.1 0.0141 P2.5 retina CCTTTAGTCC (27) 5.3 0.0053 P2.5 retina CTGCTTTCCC (4) 1.8 0.0018 P2.5 retina TATATGTATG (5) 1.8 0.0018 P4.5 retina CCTTTAGTCC (27) 4 0.004 P4.5 retina GAAGATGGAG (7) 4 0.004 P6.5 retina CCTTTAGTCC (27) 3.3 0.0033 P6.5 retina GAAGATGGAG (7) 3.3 0.0033 P10.5 crx- retina CCTTTAGTCC (27) 1.9 0.0019 P10.5 crx+ retina CCTTTAGTCC (27) 5.8 0.0058 P10.5 crx+ retina GAAGATGGAG (7) 3.8 0.0038 Adult retinal CCTTTAGTCC (27) 3.7 0.0037 Adult retinal CTGCTTTCCC (4) 3.7 0.0037 Adult retinal GAAGATGGAG (7) 3.7 0.0037 ONL CCTTTAGTCC (27) 7.7 0.0077 ONL GAAGATGGAG (7) 5.7 0.0057 ONL ATTTAGGAGG 1.9 0.0019