Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.131328
D230019K20Rik
RIKEN cDNA D230019K20 gene
15
213988
Mm.131328
2700090M07Rik
RIKEN cDNA 2700090M07 gene
15
72625
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 69 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTGTGGGGG (
7
)
8.2
0.0082
P8 Cb GC
GTTTGTTTGG (
6
)
1.6
0.0016
Cb medulloblastoma
AGAAGCTAAA
(
3
)
4.6
0.0046
Cb medulloblastoma
GAGACTTGAG
(
5
)
2.3
0.0023
Cb medulloblastoma
GTGGTGGCAC (
3
)
2.3
0.0023
Cb medulloblastoma
TTTGTGGGGG (
7
)
2.3
0.0023
P8 GC+1d culture
GACTCTGCCT
(
6
)
4.6
0.0046
P8 GC+1d culture
GGACAATCAA
(
4
)
2.3
0.0023
P8 GC+1d culture
GTGGTGGCAC (
3
)
2.3
0.0023
P8 GC+1d culture
CAGACAACAC (
2
)
1.1
0.0011
P8 GC+1d culture
GGAGAAGACC (
6
)
1.1
0.0011
P8 GC+1d culture
GTTTGTTTGG (
6
)
1.1
0.0011
P8 GC+1d culture
TTTGTGGGGG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTGTGGGGG (
7
)
2.3
0.0023
P8 GC+SHH+1d culture
AACGCCAACC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
AGAAGCTAAA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GACTCTGCCT
(
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GGAGAAGACC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGTGGCAC (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTTGTTTGG (
6
)
1.2
0.0012
3T3 fibroblasts
AACGCCAACC
(
4
)
7
0.007
3T3 fibroblasts
GACTCTGCCT
(
6
)
7
0.007
3T3 fibroblasts
GTGGTGGCAC (
3
)
3.5
0.0035
3T3 fibroblasts
TTTGTGGGGG (
7
)
3.5
0.0035
E15 cortex
AACGCCAACC
(
4
)
4.9
0.0049
E15 cortex
GACTCTGCCT
(
6
)
4.9
0.0049
P1 cortex
GACTCTGCCT
(
6
)
4.5
0.0045
P1 cortex
TTTGGGTGGG
(
2
)
4.5
0.0045
P1 cortex
TTTGTGGGGG (
7
)
4.5
0.0045
Hypothalamus
GTGGTGGCAC (
3
)
3.6
0.0036
Hypothalamus
CAGACAACAC (
2
)
1.8
0.0018
Hypothalamus
GGACAATCAA
(
4
)
1.8
0.0018
Hypothalamus
TTTGTGGGGG (
7
)
1.8
0.0018
E12.5 retina
TTTGTGGGGG (
7
)
1.9
0.0019
E14.5 retina
AACGCCAACC
(
4
)
1.8
0.0018
E16.5 retina
AACGCCAACC
(
4
)
1.8
0.0018
E16.5 retina
GTGGTGGCAC (
3
)
1.8
0.0018
P0.5 retina
GACTCTGCCT
(
6
)
5.9
0.0059
P0.5 retina
GAGACTTGAG
(
5
)
3.9
0.0039
P0.5 retina
GTGGTGGCAC (
3
)
3.9
0.0039
P0.5 retina
GTTTGTTTGG (
6
)
3.9
0.0039
P0.5 retina
TTTGGGTGGG
(
2
)
3.9
0.0039
P0.5 retina
TTTGTGGGGG (
7
)
2
0.002
P2.5 retina
AGAAGCTAAA
(
3
)
3.5
0.0035
P2.5 retina
AACGCCAACC
(
4
)
1.8
0.0018
P2.5 retina
GACTCTGCCT
(
6
)
1.8
0.0018
P2.5 retina
GGAGAAGACC (
6
)
1.8
0.0018
P2.5 retina
GTTTGTTTGG (
6
)
1.8
0.0018
P2.5 retina
TGTGTGTTGG
(
2
)
1.8
0.0018
P2.5 retina
TTTGGGTGGG
(
2
)
1.8
0.0018
P4.5 retina
AGAAGCTAAA
(
3
)
4
0.004
P4.5 retina
GTTTGTTTGG (
6
)
2
0.002
P4.5 retina
TTTGTGGGGG (
7
)
2
0.002
P6.5 retina
GTTTGTTTGG (
6
)
3.3
0.0033
P6.5 retina
TTTGGGTGGG
(
2
)
3.3
0.0033
P6.5 retina
AACGCCAACC
(
4
)
1.7
0.0017
P6.5 retina
GACTCTGCCT
(
6
)
1.7
0.0017
P10.5 crx- retina
CAGACAACAC (
2
)
1.9
0.0019
P10.5 crx- retina
GACTCTGCCT
(
6
)
1.9
0.0019
P10.5 crx+ retina
AGAAGCTAAA
(
3
)
3.8
0.0038
P10.5 crx+ retina
AACGCCAACC
(
4
)
1.9
0.0019
Adult retinal
TTTGGGTGGG
(
2
)
3.7
0.0037
Adult retinal
TTTGTGGGGG (
7
)
3.7
0.0037
Adult retinal
GACTCTGCCT
(
6
)
1.9
0.0019
Adult retinal
TGTGTGTTGG
(
2
)
1.9
0.0019
ONL
GTGGTGGCAC (
3
)
3.8
0.0038
ONL
GTTTGTTTGG (
6
)
1.9
0.0019
ONL
TGTGTGTTGG
(
2
)
1.9
0.0019
ONL
TTTGTGGGGG (
7
)
1.9
0.0019
