Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.131530	Camk2a	calcium/calmodulin-dependent protein kinase II alpha	18	18 33.0 cM	12322
Gene Ontology	ATP binding | autophosphorylation | calcium ion transport | calcium/calmodulin-dependent protein kinase activity | calcium/calmodulin-dependent protein kinase complex | calmodulin binding | G1/S transition of mitotic cell cycle | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | regulation of neurotransmitter secretion | transferase activity
Human Homolog	CAMK2A[calcium/calmodulin-dependent protein kinase (CaM kinase) II alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC CAGGCAAAAC (40) 11.4 0.0114 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma CAGGCAAAAC (40) 4.6 0.0046 Cb medulloblastoma ACTTTATATG (3) 2.3 0.0023 Cb medulloblastoma CACACACTCA (6) 2.3 0.0023 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture CAGGCAAAAC (40) 5.7 0.0057 P8 GC+1d culture CACACGCACA (15) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture CAGGCAAAAC (40) 11.7 0.0117 P8 GC+SHH+1d culture CACACACTCA (6) 1.2 0.0012 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts CAGGCAAAAC (40) 10.5 0.0105 E15 cortex CAGGCAAAAC (40) 4.9 0.0049 E15 cortex GCTTCCCCAC (3) 4.9 0.0049 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex ACTTTATATG (3) 9.1 0.0091 P1 cortex CAGGCAAAAC (40) 9.1 0.0091 P1 cortex GCTTCCCCAC (3) 4.5 0.0045 P1 cortex GTGACTGTGA (5) 4.5 0.0045 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus CAGGCAAAAC (40) 5.4 0.0054 Hypothalamus ACTTTATATG (3) 3.6 0.0036 Hypothalamus CACACACTCA (6) 1.8 0.0018 Hypothalamus CACACGCACA (15) 1.8 0.0018 Hypothalamus GCTTCCCCAC (3) 1.8 0.0018 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E12.5 retina CAGGCAAAAC (40) 20.7 0.0207 E12.5 retina CACACACTCA (6) 1.9 0.0019 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina CAGGCAAAAC (40) 12.8 0.0128 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina CAGGCAAAAC (40) 9.1 0.0091 E16.5 retina GTGACTGTGA (5) 1.8 0.0018 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina CAGGCAAAAC (40) 12.7 0.0127 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina CAGGCAAAAC (40) 13.7 0.0137 P0.5 retina CACACACTCA (6) 2 0.002 P0.5 retina CACACGCACA (15) 2 0.002 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina CAGGCAAAAC (40) 24.6 0.0246 P2.5 retina GTGACTGTGA (5) 1.8 0.0018 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina CAGGCAAAAC (40) 13.9 0.0139 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina CAGGCAAAAC (40) 16.7 0.0167 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina CAGGCAAAAC (40) 11.1 0.0111 P10.5 crx- retina CACACACTCA (6) 3.7 0.0037 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina CAGGCAAAAC (40) 13.5 0.0135 P10.5 crx+ retina CACACACTCA (6) 5.8 0.0058 P10.5 crx+ retina CACACGCACA (15) 1.9 0.0019 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 Adult retinal CAGGCAAAAC (40) 11.1 0.0111 Adult retinal CACACACTCA (6) 7.4 0.0074 Adult retinal CACACGCACA (15) 1.9 0.0019 ONL CAGGCAAAAC (40) 34.5 0.0345 ONL TGTGTGTGTG (115) 23 0.023 ONL CACACGCACA (15) 5.7 0.0057 ONL CACACACTCA (6) 1.9 0.0019