Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.131555
1700010L13Rik
RIKEN cDNA 1700010L13 gene
19
75628
Mm.131555
A630007B06Rik
RIKEN cDNA A630007B06 gene
19
213993
Human Homolog
C10orf118[chromosome 10 open reading frame 118]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCTAATCTGT (
4
)
3.3
0.0033
P8 Cb GC
ACGTCAGTGC
(
2
)
1.6
0.0016
P8 Cb GC
CCCATCATCC
(
6
)
1.6
0.0016
P8 Cb GC
GACTTGGAGA
(
4
)
1.6
0.0016
P8 Cb GC
TGAAATAAAA (
9
)
1.6
0.0016
Cb medulloblastoma
TGAAATAAAA (
9
)
11.6
0.0116
Cb medulloblastoma
CCCATCATCC
(
6
)
2.3
0.0023
P8 GC+1d culture
CCTGCTGCTC
(
14
)
4.6
0.0046
P8 GC+1d culture
CCCATCATCC
(
6
)
3.4
0.0034
P8 GC+1d culture
TGAAATAAAA (
9
)
3.4
0.0034
P8 GC+1d culture
ACGTCAGTGC
(
2
)
1.1
0.0011
P8 GC+1d culture
AGTTCAAAGC
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTGCTGCTC
(
14
)
3.5
0.0035
3T3 fibroblasts
ACGTCAGTGC
(
2
)
3.5
0.0035
3T3 fibroblasts
CCCATCATCC
(
6
)
3.5
0.0035
E15 cortex
TGAAATAAAA (
9
)
4.9
0.0049
P1 cortex
TGAAATAAAA (
9
)
13.6
0.0136
P1 cortex
TCTAATCTGT (
4
)
4.5
0.0045
Hypothalamus
TGAAATAAAA (
9
)
12.7
0.0127
Hypothalamus
GACTTGGAGA
(
4
)
1.8
0.0018
E12.5 retina
CCCATCATCC
(
6
)
9.4
0.0094
E12.5 retina
CCTGCTGCTC
(
14
)
5.6
0.0056
E12.5 retina
TGAAATAAAA (
9
)
5.6
0.0056
E12.5 retina
AGTTCAAAGC
(
6
)
1.9
0.0019
E14.5 retina
TGAAATAAAA (
9
)
5.5
0.0055
E16.5 retina
TGAAATAAAA (
9
)
10.9
0.0109
E16.5 retina
CCTGCTGCTC
(
14
)
5.4
0.0054
E16.5 retina
CCCATCATCC
(
6
)
1.8
0.0018
E18.5 retina
TGAAATAAAA (
9
)
9.1
0.0091
E18.5 retina
CCCATCATCC
(
6
)
1.8
0.0018
E18.5 retina
CCTGCTGCTC
(
14
)
1.8
0.0018
P2.5 retina
CCCATCATCC
(
6
)
3.5
0.0035
P2.5 retina
TGAAATAAAA (
9
)
1.8
0.0018
P4.5 retina
TGAAATAAAA (
9
)
15.9
0.0159
P4.5 retina
CCTGCTGCTC
(
14
)
4
0.004
P4.5 retina
AGTTCAAAGC
(
6
)
2
0.002
P6.5 retina
TGAAATAAAA (
9
)
5
0.005
P6.5 retina
CCCATCATCC
(
6
)
1.7
0.0017
P6.5 retina
CCTGCTGCTC
(
14
)
1.7
0.0017
P10.5 crx- retina
TGAAATAAAA (
9
)
3.7
0.0037
P10.5 crx- retina
CCTGCTGCTC
(
14
)
1.9
0.0019
P10.5 crx+ retina
CCTGCTGCTC
(
14
)
5.8
0.0058
P10.5 crx+ retina
TGAAATAAAA (
9
)
3.8
0.0038
P10.5 crx+ retina
CCCATCATCC
(
6
)
1.9
0.0019
Adult retinal
CCTGCTGCTC
(
14
)
3.7
0.0037
Adult retinal
TGAAATAAAA (
9
)
1.9
0.0019
ONL
AGTTCAAAGC
(
6
)
5.7
0.0057
ONL
TGAAATAAAA (
9
)
3.8
0.0038
ONL
GACTTGGAGA
(
4
)
1.9
0.0019
