Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.133193
6330509G02Rik
RIKEN cDNA 6330509G02 gene
11
268481
Gene Ontology
intermediate filament
Human Homolog
MGC45562[hypothetical protein MGC45562]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 37 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TGGTTACTGG
(
10
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGGTTACTGG
(
10
)
2.3
0.0023
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
TGACACACAA
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TGGTTACTGG
(
10
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGGTTACTGG
(
10
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TGGTTACTGG
(
10
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGGTTACTGG
(
10
)
14.6
0.0146
E14.5 retina
TGACACACAA
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TGGTTACTGG
(
10
)
19.9
0.0199
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGTTACTGG
(
10
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGGTTACTGG
(
10
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGGTTACTGG
(
10
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGACACACAA
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TGGTTACTGG
(
10
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGGTTACTGG
(
10
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGGTTACTGG
(
10
)
7.7
0.0077
ONL
TGACACACAA
1.9
0.0019
